RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ACOT7O00154 380 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 AQP7O14520 342 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 PGRMC2O15173 223 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 TMPRSS11DO60235 418 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 CLEC3AO75596 197 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 WISP3O95389 354 aaPredicted RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 TTC4O95801 387 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 IGHG3P01860 377 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ENO2P09104 434 aaPredicted RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 CT62P0C5K7 136 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 CD1DP15813 335 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 GDF1P27539 372 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 NOS3P29474 1203 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 SSR2P43308 183 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 SLCO1A2P46721 670 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 FNTAP49354 379 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF136P52737 540 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 IRF8Q02556 426 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 SRYQ05066 204 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 MGAT5Q09328 741 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 DUSP8Q13202 625 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 SLAMF1Q13291 335 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 TOMM20Q15388 145 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ADPRMQ3LIE5 342 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 PIGGQ5H8A4 983 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 WIPI1Q5MNZ9 446 aaPredicted RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 WLSQ5T9L3 541 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 SLC22A10Q63ZE4 541 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 LRRC8EQ6NSJ5 796 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 FDX2Q6P4F2 183 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF662Q6ZS27 426 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 GK5Q6ZS86 529 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 YRDCQ86U90 279 aaKnown RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 LSRQ86X29 649 aaPredicted RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF595Q8IYB9 648 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ZBED8Q8IZ13 594 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 CLYBLQ8N0X4 340 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 KRT78Q8N1N4 520 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 OR14A16Q8NHC5 309 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF473Q8WTR7 871 aaKnown RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 SLC44A1Q8WWI5 657 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 WFDC12Q8WWY7 111 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 DAZLQ92904 295 aaKnown RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 PDLIM5Q96HC4 596 aaKnown RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 DGAT2Q96PD7 388 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 KRT12Q99456 494 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 MS4A8Q9BY19 250 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 FAM129AQ9BZQ8 928 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 KCNF1Q9H3M0 494 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF703Q9H7S9 590 aaPredicted RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ANKRA2Q9H9E1 313 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 RASSF1Q9NS23 344 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 RNF14Q9UBS8 474 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 KCNN3Q9UGI6 736 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 SNX12Q9UMY4 172 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 DTX4Q9Y2E6 619 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 RPH3AQ9Y2J0 694 aaPredicted RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 JRKLQ9Y4A0 524 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 CHCHD2Q9Y6H1 151 aaPredicted RBP6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ROS1P08922 2347 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 COL6A5A8TX70 2615 aa6.27□□□□□ -1.41
PRPF40B-214ENST00000551320 ANK3Q12955 4377 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 A0A1B0GTL3 188 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 A0A1B0GVC2 190 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 A0A1W2PR48 441 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 FAM221AA4D161 298 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 A6NNC1 897 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 KIAA1324LA8MWY0 1029 aaPredicted RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 GOLGA6L6A8MZA4 724 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 SUPT3HB4E1H0 165 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 EEF1E1-BLOC1S5C9J1V9 151 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 PLPP1O14494 284 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 BCKDKO14874 412 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 SMAD7O15105 426 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 EEF1E1O43324 174 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 SUPT3HO75486 399 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 STK16O75716 305 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 IGKV3-11P04433 115 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 DRD2P14416 443 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 HIST1H1TP22492 207 aaPredicted RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 STARP49675 285 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 GSK3AP49840 483 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 GPX6P59796 221 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 RPS13P62277 151 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 PPP2R2AP63151 447 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 SKP1P63208 163 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 DR1Q01658 176 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 DUSP2Q05923 314 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 LTBQ06643 244 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 EXOSC7Q15024 291 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 TERF2Q15554 542 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 PDK4Q16654 411 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 AP5B1Q2VPB7 878 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 ACSF3Q4G176 576 aaPredicted RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 FNDC7Q5VTL7 733 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 FBXW10Q5XX13 1052 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 OR5M10Q6IEU7 315 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 PAOXQ6QHF9 649 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 OPN5Q6U736 354 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 LUZP2Q86TE4 346 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms