RNA–Protein interactions for RNA: ENST00000550632.5

USP15-216, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-216ENST00000550632 OR1J4Q8NGS1 313 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 FBXL8Q96CD0 374 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 LINGO1Q96FE5 620 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 TMEM41AQ96HV5 264 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 HS6ST2Q96MM7 605 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 RHNO1Q9BSD3 238 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 ERVK-6Q9BXR3 956 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 REXO4Q9GZR2 422 aaKnown RBP13.36□□□□□ -0.27
USP15-216ENST00000550632 CHODLQ9H9P2 273 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 FETUBQ9UGM5 382 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 PACSIN2Q9UNF0 486 aaPredicted RBP13.36□□□□□ -0.27
USP15-216ENST00000550632 ERVK-19Q9WJR5 959 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 SLC22A14Q9Y267 594 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
USP15-216ENST00000550632 YLPM1P49750 1951 aaKnown RBP13.36□□□□□ -0.27
USP15-216ENST00000550632 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 IQANK1A0A1B0GTG1 560 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 LIASO43766 372 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 LMX1BO60663 402 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 MFAP3LO75121 409 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 SLC1A2P43004 574 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 RGS4P49798 205 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 LHX2P50458 406 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 PGGT1BP53609 377 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 TERF1P54274 439 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 NAP1L1P55209 391 aaKnown RBP13.35□□□□□ -0.27
USP15-216ENST00000550632 VLDLRP98155 873 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 THOC5Q13769 683 aaKnown RBP13.35□□□□□ -0.27
USP15-216ENST00000550632 RCN2Q14257 317 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 ZNF267Q14586 743 aaPredicted RBP13.35□□□□□ -0.27
USP15-216ENST00000550632 EBPQ15125 230 aaKnown RBP13.35□□□□□ -0.27
USP15-216ENST00000550632 PDLIM3Q53GG5 364 aaPredicted RBP13.35□□□□□ -0.27
USP15-216ENST00000550632 DESI1Q6ICB0 168 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 TRIM40Q6P9F5 258 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 ABHD17CQ6PCB6 329 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 RNF111Q6ZNA4 994 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 MEX3DQ86XN8 651 aaKnown RBP13.35□□□□□ -0.27
USP15-216ENST00000550632 TAGAPQ8N103 731 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.35□□□□□ -0.27
USP15-216ENST00000550632 C1orf54Q8WWF1 131 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 CAVIN3Q969G5 261 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 FBXL20Q96IG2 436 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 NTMT1Q9BV86 223 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 L2HGDHQ9H9P8 463 aa13.35□□□□□ -0.27
USP15-216ENST00000550632 PABPN1LA6NDY0 278 aaKnown RBP13.34□□□□□ -0.27
USP15-216ENST00000550632 SLC22A20A6NK97 555 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 CDC7O00311 574 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 CLOCKO15516 846 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 CLPSP04118 112 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 CRHP06850 196 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 THBS1P07996 1170 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 SLC6A12P48065 614 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 CLDN18P56856 261 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
USP15-216ENST00000550632 FUT7Q11130 342 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 SLBPQ14493 270 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP15-216ENST00000550632 FAM174BQ3ZCQ3 159 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 FAM120AOSQ5T036 256 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 CYB5R2Q6BCY4 276 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 SCIMPQ6UWF3 145 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 ZNF793Q6ZN11 406 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 VN1R5Q7Z5H4 357 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 CCDC89Q8N998 374 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 SMAP2Q8WU79 429 aaPredicted RBP13.34□□□□□ -0.27
USP15-216ENST00000550632 FIG4Q92562 907 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 REPS1Q96D71 796 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
USP15-216ENST00000550632 LCORQ96JN0 433 aaPredicted RBP13.34□□□□□ -0.27
USP15-216ENST00000550632 F2RL3Q96RI0 385 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 PHACTR1Q9C0D0 580 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 C12orf65Q9H3J6 166 aaKnown RBP13.34□□□□□ -0.27
USP15-216ENST00000550632 PRDM7Q9NQW5 492 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 WWOXQ9NZC7 414 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 PAK5Q9P286 719 aa13.34□□□□□ -0.27
USP15-216ENST00000550632 MALRD1Q5VYJ5 2156 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 SLC35F4A4IF30 521 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 RTCAO00442 366 aaKnown RBP13.33□□□□□ -0.28
USP15-216ENST00000550632 HCRTR2O43614 444 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 DYRK3O43781 588 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 IGHV4-31P0DP07 118 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 GMPRP36959 345 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 GFRA1P56159 465 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 SLC37A1P57057 533 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 IGLV3-21P80748 117 aaPredicted RBP13.33□□□□□ -0.28
USP15-216ENST00000550632 DHX34Q14147 1143 aaKnown RBP13.33□□□□□ -0.28
USP15-216ENST00000550632 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 LRRC8EQ6NSJ5 796 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 CASC4Q6P4E1 433 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 IFNEQ86WN2 208 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 FBXW5Q969U6 566 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 ZNF669Q96BR6 464 aaPredicted RBP13.33□□□□□ -0.28
USP15-216ENST00000550632 METTL7AQ9H8H3 244 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 GALNT9Q9HCQ5 603 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.33□□□□□ -0.28
USP15-216ENST00000550632 IKZF3Q9UKT9 509 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 RNF112Q9ULX5 631 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 MAD1L1Q9Y6D9 718 aa13.33□□□□□ -0.28
USP15-216ENST00000550632 KCNE2Q9Y6J6 123 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms