RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ALDH4A1P30038 563 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 CTHP32929 405 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 SOX6P35712 828 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 NUDT1P36639 197 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 MASP1P48740 699 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 XKP51811 444 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 RPS26P62854 115 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ILF3Q12906 894 aaKnown RBP eCLIP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 C1DQ13901 141 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 GANABQ14697 944 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 CEBPEQ15744 281 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 DUSP7Q16829 419 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 RPS26P11Q5JNZ5 115 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 TMEM201Q5SNT2 666 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 RNLSQ5VYX0 342 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF770Q6IQ21 691 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 TCTN3Q6NUS6 607 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 KLHL17Q6TDP4 642 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ENPP7Q6UWV6 458 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 Q6ZNX1 250 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ABHD13Q7L211 337 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 RRM2BQ7LG56 351 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 CCDC71Q8IV32 467 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 TRIM48Q8IWZ4 208 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 MMP21Q8N119 569 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 CAMKVQ8NCB2 501 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 OR9Q2Q8NGE9 314 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 OR8K5Q8NH50 307 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF675Q8TD23 568 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 APOBEC4Q8WW27 367 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 KLHL6Q8WZ60 621 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 SGCDQ92629 289 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 GGHQ92820 318 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 PMM1Q92871 262 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 FGF14Q92915 247 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 RAB8BQ92930 207 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 LGALS12Q96DT0 336 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 SH3YL1Q96HL8 342 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 PRRC1Q96M27 445 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 TRNT1Q96Q11 434 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 CSF3RQ99062 836 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 NIPSNAP1Q9BPW8 284 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ACTRT3Q9BYD9 372 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 PBX4Q9BYU1 374 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 POLR2J2Q9GZM3 115 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 MKRN2Q9H000 416 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 PRDM8Q9NQV8 689 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 FBXO8Q9NRD0 319 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 FAIMQ9NVQ4 179 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 RLIMQ9NVW2 624 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 TRNAU1APQ9NX07 287 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 GIN1Q9NXP7 522 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 GALNT8Q9NY28 637 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF226Q9NYT6 803 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 FTSJ1Q9UET6 329 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 NDOR1Q9UHB4 597 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF232Q9UNY5 417 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 IFT52Q9Y366 437 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 KLK4Q9Y5K2 254 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 DSPPQ9NZW4 1301 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 HTTP42858 3142 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 COL4A3Q01955 1670 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 IGKV1-8A0A0C4DH67 115 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PNMA8CA0A1B0GUJ8 204 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 A0A1W2PR48 441 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PRAMEF25A6NGN4 478 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 SAGE2PA6NJ88 616 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 OR52A4PA6NMU1 304 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 H3BN98 237 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 J3KTA2 159 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 AXIN1O15169 862 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PROM1O43490 865 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 TNFSF14O43557 240 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 B3GALT2O43825 422 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 NME6O75414 186 aaPredicted RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 AIFM1O95831 613 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 LGI1O95970 557 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 FUCA1P04066 466 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ALPPP05187 535 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ALOX5P09917 674 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 OCM2P0CE71 109 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 OCMP0CE72 109 aaPredicted RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 F3P13726 295 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 GLULP15104 373 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 GABRB1P18505 474 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 CHMP24386 653 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ELAVL4P26378 380 aaKnown RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 POU1F1P28069 291 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 EPHA2P29317 976 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 CD6P30203 668 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 MAT2AP31153 395 aaKnown RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PRKAR1BP31321 381 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 S100A5P33763 92 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 SMSP52788 366 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 BTN3A2P78410 334 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ST3GAL4Q11206 333 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 KRR1Q13601 381 aaKnown RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PUM1Q14671 1186 aaKnown RBP eCLIP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 NCF4Q15080 339 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 OCLNQ16625 522 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms