RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 C2orf92A0A1B0GVN3 265 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 TUBAL3A6NHL2 446 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 SYCE1LA8MT33 242 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 CXorf49A8MYA2 514 aaPredicted RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 PLPP1O14494 284 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 EIF3HO15372 352 aaKnown RBP eCLIP12.45□□□□□ -0.42
TROAP-211ENST00000549891 KERAO60938 352 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 TRAPPC6AO75865 159 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 RAF1P04049 648 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 GSTA2P09210 222 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 NR2F6P10588 404 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 DRD2P14416 443 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 HOXB4P17483 251 aaPredicted RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 TACR1P25103 407 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 PTX3P26022 381 aaPredicted RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 MASP1P48740 699 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 HNRNPH2P55795 449 aaKnown RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 NRG3P56975 720 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 CRYZQ08257 329 aaKnown RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 GRTP1Q5TC63 336 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 NSUN5P2Q63ZY6 315 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 CYP20A1Q6UW02 462 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 PAMR1Q6UXH9 720 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 ISCA2Q86U28 154 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 MYLK4Q86YV6 388 aaPredicted RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 CREG2Q8IUH2 290 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 CTAGE3PQ8IX95 158 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 NAXEQ8NCW5 288 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 MTERF1Q99551 399 aaKnown RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 TIMP4Q99727 224 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 SORBS1Q9BX66 1292 aaKnown RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 PRDM14Q9GZV8 571 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 SAYSD1Q9NPB0 183 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 SNX24Q9Y343 169 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 SAR1BQ9Y6B6 198 aa12.45□□□□□ -0.42
TROAP-211ENST00000549891 FLNAP21333 2647 aaKnown RBP12.45□□□□□ -0.42
TROAP-211ENST00000549891 TCRBV9S1A1TA0A576 114 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 FAM159BA6NKW6 160 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 CDH16O75309 829 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 PRKRAO75569 313 aaKnown RBP12.44□□□□□ -0.42
TROAP-211ENST00000549891 LRATO95237 230 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 HPNP05981 417 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 LTA4HP09960 611 aaKnown RBP12.44□□□□□ -0.42
TROAP-211ENST00000549891 SLC35E2BP0CK96 405 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 SLC35E2P0CK97 266 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 EPXP11678 715 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 CRABP2P29373 138 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 OPRM1P35372 400 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 ADAM8P78325 824 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 SORDQ00796 357 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 CUL3Q13618 768 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 KEAP1Q14145 624 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 SLMAPQ14BN4 828 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 C6orf163Q5TEZ5 329 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 C3orf62Q6ZUJ4 267 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 TEX9Q8N6V9 391 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 RILPQ96NA2 401 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 ATOH8Q96SQ7 321 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 ANGPTL4Q9BY76 406 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 ACTR8Q9H981 624 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 DLL4Q9NR61 685 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 TRMT1Q9NXH9 659 aaKnown RBP12.44□□□□□ -0.42
TROAP-211ENST00000549891 NPFFR2Q9Y5X5 522 aa12.44□□□□□ -0.42
TROAP-211ENST00000549891 A0A0A6YYD5 115 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 CCDC189A1A4V9 331 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 GLOD5A6NK44 160 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 H0YIV9 168 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 UBXN8O00124 270 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 UGDHO60701 494 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 FAM58BPP0C7Q3 252 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 KRT15P19012 456 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 CTSSP25774 331 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 PIK3R1P27986 724 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 GCKP35557 465 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 CDK9P50750 372 aaKnown RBP12.43□□□□□ -0.42
TROAP-211ENST00000549891 ZNF136P52737 540 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 FBXW4P57775 412 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 RPS13P62277 151 aaKnown RBP12.43□□□□□ -0.42
TROAP-211ENST00000549891 RCAN2Q14206 197 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 TOMM20Q15388 145 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 DEFB113Q30KQ7 82 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 NHSL2Q5HYW2 709 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 VASNQ6EMK4 673 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 OR52E8Q6IFG1 317 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 MRM1Q6IN84 353 aaKnown RBP12.43□□□□□ -0.42
TROAP-211ENST00000549891 CCDC91Q7Z6B0 441 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 NUDT13Q86X67 352 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 RNF175Q8N4F7 328 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 ZNF441Q8N8Z8 693 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 RHEBL1Q8TAI7 183 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 SPPL2AQ8TCT8 520 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 DOK4Q8TEW6 326 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 TRIB1Q96RU8 372 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 UBQLN3Q9H347 655 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 DDX31Q9H8H2 851 aaKnown RBP12.43□□□□□ -0.42
TROAP-211ENST00000549891 CALHM2Q9HA72 323 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 TEX10Q9NXF1 929 aaPredicted RBP12.43□□□□□ -0.42
TROAP-211ENST00000549891 PSD3Q9NYI0 1048 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 WHRNQ9P202 907 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms