RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ATP6AP2A0A1C7CYW4 349 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 GSAPA4D1B5 854 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 C5orf60A6NFR6 353 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 ERICH4A6NGS2 130 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 PCP4L1A6NKN8 68 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 A8MVM7 634 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 MED7O43513 233 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 SDC3O75056 442 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 WBP4O75554 376 aaKnown RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 MT-ND2P03891 347 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 ATP1B1P05026 303 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 UMODP07911 640 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 GP1BBP13224 206 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 GALP22466 123 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 CA4P22748 312 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 ACKR3P25106 362 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 CTNNA2P26232 953 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 CA8P35219 290 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 CEBPDP49716 269 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 DNA2P51530 1060 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 MYL7Q01449 175 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 POU3F1Q03052 451 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 PLD1Q13393 1074 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 NFATC2Q13469 925 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 GPR50Q13585 617 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 HERC3Q15034 1050 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 MRGPRG-AS1Q2M3A8 158 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF672Q499Z4 452 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 GPR33Q49SQ1 333 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 HSP90AB3PQ58FF7 597 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 PHYHD1Q5SRE7 291 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 DDI2Q5TDH0 399 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 TTC23Q5W5X9 447 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 ASPHD2Q6ICH7 369 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 METAP1DQ6UB28 335 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 FIP1L1Q6UN15 594 aaKnown RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 CBLN3Q6UW01 205 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 DHRS11Q6UWP2 260 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 CENPUQ71F23 418 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 SLC24A5Q71RS6 500 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 SLC22A16Q86VW1 577 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 MUC20Q8N307 709 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 NECAB1Q8N987 351 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 CNBD1Q8NA66 436 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 OR2T12Q8NG77 320 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 AGR3Q8TD06 166 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 ATP8B4Q8TF62 1192 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 TCP11Q8WWU5 503 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF75CPQ92670 426 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 GIMAP5Q96F15 307 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 SCMH1Q96GD3 660 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 COG3Q96JB2 828 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 DEFB118Q96PH6 123 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 JPH2Q9BR39 696 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 LAT2Q9GZY6 243 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 FKRPQ9H9S5 495 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 UBTD1Q9HAC8 227 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 HYPKQ9NX55 129 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 GDAP2Q9NXN4 497 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 OR6C2Q9NZP2 312 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 P2RX2Q9UBL9 471 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 LHX3Q9UBR4 397 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 DBF4Q9UBU7 674 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-210ENST00000547654 MAN1B1Q9UKM7 699 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 OR1A2Q9Y585 309 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 MED14O60244 1454 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 TAF1P21675 1872 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 SPHKAPQ2M3C7 1700 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 UMODL1Q5DID0 1318 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ARPC4-TTLL3A0A0A6YYG9 625 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 LOC101059948A0A1B0GTJ6 334 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 GOLGA8OA6NCC3 632 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 YJEFN3A6XGL0 299 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 PPIAL4DF5H284 164 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 GOLGA8NF8WBI6 632 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 H0YIV9 168 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 BUB1O43683 1085 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 XPNPEP2O43895 674 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 RHBDL1O75783 438 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 UFL1O94874 794 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ZBTB11O95625 1053 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 MBD3O95983 291 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 MT-ND1P03886 318 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ASGR1P07306 291 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ANXA4P09525 319 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 IGHV4-31P0DP07 118 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 GZMAP12544 262 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 TRIM23P36406 574 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 MATKP42679 507 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 NPY2RP49146 381 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 SUCLG1P53597 346 aaKnown RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 LIMK2P53671 638 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 SP3Q02447 781 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 LGALS3BPQ08380 585 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ZBTB17Q13105 803 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 GRB14Q14449 540 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 RBM39Q14498 530 aaKnown RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 EXOC3L2Q2M3D2 409 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 CAVIN4Q5BKX8 364 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 DCAF10Q5QP82 559 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms