RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CCNL2Q96S94 520 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 MAPKAP1Q9BPZ7 522 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 CRB3Q9BUF7 120 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 EFHD1Q9BUP0 239 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 GPR87Q9BY21 358 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 VN1R1Q9GZP7 353 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 CCDC134Q9H6E4 229 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 DDX31Q9H8H2 851 aaKnown RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 MEAF6Q9HAF1 191 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 CLK4Q9HAZ1 481 aaKnown RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 LRTM1Q9HBL6 345 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 PFDN4Q9NQP4 134 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 LANCL2Q9NS86 450 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 PNPOQ9NVS9 261 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 C1orf109Q9NX04 203 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 TEX10Q9NXF1 929 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 GIMAP2Q9UG22 337 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 IL17BQ9UHF5 180 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 MCM8Q9UJA3 840 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 C3orf18Q9UK00 162 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 MRPS33Q9Y291 106 aaKnown RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 TMA7Q9Y2S6 64 aaKnown RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 TMED5Q9Y3A6 229 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 PTRH2Q9Y3E5 179 aaKnown RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 POLR3HQ9Y535 204 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 MRPS18BQ9Y676 258 aaKnown RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 SPACA6W5XKT8 324 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 KALRNO60229 2985 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 SPENQ96T58 3664 aaKnown RBP5.95□□□□□ -1.46
PRKDC-211ENST00000546304 FAM208BQ5VWN6 2430 aa5.95□□□□□ -1.46
PRKDC-211ENST00000546304 CPAMD8Q8IZJ3 1885 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 SMG1Q96Q15 3661 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 A0A087WV48 116 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 TRPC5OSA6NMA1 111 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF891A8MT65 544 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 CYR61O00622 381 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 SDHDO14521 159 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 EDF1O60869 148 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 B4GALT2O60909 372 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 DNAJB6O75190 326 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 PRKRAO75569 313 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 BMP10O95393 424 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 UMODP07911 640 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 FAM58BPP0C7Q3 252 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 PRR35P0CG20 571 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 MED14OSP0DP75 135 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 ALOX15P16050 662 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 SDC1P18827 310 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 WT1P19544 449 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 CPN2P22792 545 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 MDH1P40925 334 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 GSTM5P46439 218 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 HNRNPFP52597 415 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 EFNA3P52797 238 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 UCNP55089 124 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 RAE1P78406 368 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 CDC20Q12834 499 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 SLAMF1Q13291 335 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 RUNX2Q13950 521 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 TUBB8Q3ZCM7 444 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 CCNYL2Q5T2Q4 361 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 BROXQ5VW32 411 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 OR52E8Q6IFG1 317 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 MRM1Q6IN84 353 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 NOXRED1Q6NXP6 359 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 QSOX2Q6ZRP7 698 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 Q6ZSR9 355 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 IKBIPQ70UQ0 350 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 MRGPREQ86SM8 312 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 GPR180Q86V85 440 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 RAB43Q86YS6 212 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 TMEM151BQ8IW70 566 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 WDR75Q8IWA0 830 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 SCUBE1Q8IWY4 988 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 FNDC5Q8NAU1 212 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 TMEM52Q8NDY8 209 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 CDC26Q8NHZ8 85 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 CHTF18Q8WVB6 975 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 TSLPQ969D9 159 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 FCRL1Q96LA6 429 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 C1orf50Q9BV19 199 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 WDR41Q9HAD4 459 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 GP6Q9HCN6 339 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 MYNNQ9NPC7 610 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 FGFR1OP2Q9NVK5 253 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 ERVK13-1Q9NX77 482 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 SIRT5Q9NXA8 310 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 MS4A12Q9NXJ0 267 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 KCMF1Q9P0J7 381 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 FBXW2Q9UKT8 454 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 FARSAQ9Y285 508 aaKnown RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 DLGAP4Q9Y2H0 992 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 ATG4BQ9Y4P1 393 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 MMACHCQ9Y4U1 282 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 USH1CQ9Y6N9 552 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 CHD6Q8TD26 2715 aa5.94□□□□□ -1.46
PRKDC-211ENST00000546304 NUP214P35658 2090 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-211ENST00000546304 IGKV3D-11A0A0A0MRZ8 115 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 A0A1W2PR48 441 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 BLACEA4D250 179 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms