RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 CXorf21Q9HAI6 301 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 HEY2Q9UBP5 337 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 RALYQ9UKM9 306 aaKnown RBP16.28■□□□□ 0.2
CD9-211ENST00000546073 CES1P1Q9UKY3 287 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 C2orf92A0A1B0GVN3 265 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 WASHC1A8K0Z3 465 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 A8MVJ9 347 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 PDPK1O15530 556 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 PRAMEF2O60811 474 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 ITGA10O75578 1167 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 LRATO95237 230 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 WDPCPO95876 746 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 SDC1P18827 310 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 MANFP55145 182 aaKnown RBP16.27■□□□□ 0.2
CD9-211ENST00000546073 MLF1P58340 268 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 MAP4K2Q12851 820 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 OPN5Q6U736 354 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 SPATA19Q7Z5L4 167 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 TMEM178AQ8NBL3 297 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 VPS37AQ8NEZ2 397 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 NUBPLQ8TB37 319 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 MAGEB18Q96M61 343 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 C7orf26Q96N11 449 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 ZBTB18Q99592 522 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 C20orf27Q9GZN8 174 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 AKTIPQ9H8T0 292 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 MEAF6Q9HAF1 191 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 AGPAT4Q9NRZ5 378 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 HPF1Q9NWY4 346 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 TAS2R7Q9NYW3 318 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 PLA2G3Q9NZ20 509 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 LRFN1Q9P244 771 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 MYOTQ9UBF9 498 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 PCDHGB4Q9UN71 923 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 CLDN16Q9Y5I7 305 aa16.27■□□□□ 0.2
CD9-211ENST00000546073 KMT2BQ9UMN6 2715 aaPredicted RBP16.27■□□□□ 0.19
CD9-211ENST00000546073 K7EM74 188 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 SLC28A2O43868 658 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 COQ9O75208 318 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 DDAH2O95865 285 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 PDGFAP04085 211 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 PRB1P04280 392 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 ARRB2P32121 409 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 TMED10P49755 219 aaKnown RBP16.26■□□□□ 0.19
CD9-211ENST00000546073 GPR143P51810 404 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 DCAF7P61962 342 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 RPP38P78345 283 aaKnown RBP16.26■□□□□ 0.19
CD9-211ENST00000546073 NADK2Q4G0N4 442 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 CPTPQ5TA50 214 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 DND1Q8IYX4 353 aaKnown RBP16.26■□□□□ 0.19
CD9-211ENST00000546073 ZNF843Q8N446 348 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 SLC15A4Q8N697 577 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 CLHC1Q8NHS4 586 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 ZNF721Q8TF20 911 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 UCN3Q969E3 161 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 FCRL1Q96LA6 429 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 C3orf30Q96M34 536 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 DPY30Q9C005 99 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 OR10A5Q9H207 317 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 TIMMDC1Q9NPL8 285 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 TAS2R9Q9NYW1 312 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 BAIAP2L1Q9UHR4 511 aa16.26■□□□□ 0.19
CD9-211ENST00000546073 WWP2O00308 870 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 DIAPH2O60879 1101 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 TGDSO95455 350 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 KRT20P35900 424 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 HLCSP50747 726 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 CLNS1AP54105 237 aaKnown RBP16.25■□□□□ 0.19
CD9-211ENST00000546073 OCRLQ01968 901 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 OR1C1Q15619 314 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 ZNHIT3Q15649 155 aaPredicted RBP16.25■□□□□ 0.19
CD9-211ENST00000546073 LSM12Q3MHD2 195 aaKnown RBP16.25■□□□□ 0.19
CD9-211ENST00000546073 FAM219BQ5XKK7 198 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 SLC6A19Q695T7 634 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 Q6ZS92 163 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 MMP21Q8N119 569 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 RBMXL3Q8N7X1 1067 aaKnown RBP16.25■□□□□ 0.19
CD9-211ENST00000546073 CEP70Q8NHQ1 597 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 CKAP2Q8WWK9 683 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 CNRIP1Q96F85 164 aaPredicted RBP16.25■□□□□ 0.19
CD9-211ENST00000546073 ZNF764Q96H86 408 aaPredicted RBP16.25■□□□□ 0.19
CD9-211ENST00000546073 C3orf14Q9HBI5 128 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 DDX18Q9NVP1 670 aaKnown RBP16.25■□□□□ 0.19
CD9-211ENST00000546073 ZNF446Q9NWS9 450 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 NUP210LQ5VU65 1888 aa16.25■□□□□ 0.19
CD9-211ENST00000546073 CCDC88CQ9P219 2028 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 DYNC1I1O14576 645 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 POLR3GO15318 223 aaPredicted RBP16.24■□□□□ 0.19
CD9-211ENST00000546073 CFLARO15519 480 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 TBX19O60806 448 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 OR2J2O76002 312 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 F10P00742 488 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 JUNP05412 331 aaKnown RBP16.24■□□□□ 0.19
CD9-211ENST00000546073 TNFSF10P50591 281 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 PSPHP78330 225 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 FUT7Q11130 342 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 TUBA3CQ13748 450 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 INAQ16352 499 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 MPEG1Q2M385 716 aa16.24■□□□□ 0.19
CD9-211ENST00000546073 PRICKLE4Q2TBC4 344 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms