RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 MID1IP1Q9NPA3 183 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 MIEF1Q9NQG6 463 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ANKRD10Q9NXR5 420 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 TAS2R9Q9NYW1 312 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 COQ3Q9NZJ6 369 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 EHD3Q9NZN3 535 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 STOML1Q9UBI4 398 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ATG4BQ9Y4P1 393 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ASB4Q9Y574 426 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 NUP210LQ5VU65 1888 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 FIGNL2A6NMB9 653 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ESPNB1AK53 854 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 NPIPA5E9PKD4 350 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 GOLGA8RI6L899 631 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 WWP2O00308 870 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 BCKDKO14874 412 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 LRRTM2O43300 516 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CTIFO43310 598 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 PCDH7O60245 1069 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 FGF17O60258 216 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SUSD5O60279 629 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 PLIN3O60664 434 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SLC19A2O60779 497 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 PRAMEF4O60810 478 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 COQ9O75208 318 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 EEDO75530 441 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ERAL1O75616 437 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 RSL1D1O76021 490 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 OR4F21O95013 312 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 AIFM1O95831 613 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 F10P00742 488 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ATP1B1P05026 303 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CELA2AP08217 269 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ANXA4P09525 319 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 FAM153BP0C7A2 387 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CPMP14384 443 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 NAGAP17050 411 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 EPORP19235 508 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 NT5EP21589 574 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 PTGER4P35408 488 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 PEX19P40855 299 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ASMTP46597 345 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SLCO1A2P46721 670 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 MASP1P48740 699 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 MEOX1P50221 254 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CDH13P55290 713 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 PPIAP62937 165 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 KCNJ2P63252 427 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 GALNT1Q10472 559 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 MAD2L1Q13257 205 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 MRPL49Q13405 166 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SNTA1Q13424 505 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SLC10A1Q14973 349 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 FAM153CQ494X1 144 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 VPS26BQ4G0F5 336 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 PRAMEF9Q5VWM5 478 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF324BQ6AW86 544 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SLC48A1Q6P1K1 146 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 LETMD1Q6P1Q0 360 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 LRIG3Q6UXM1 1119 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 FRMD7Q6ZUT3 714 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 R3HCC1LQ7Z5L2 792 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 UBE3DQ7Z6J8 389 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SPPL2CQ8IUH8 684 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF808Q8N4W9 903 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 FAM13CQ8NE31 585 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ZFP28Q8NHY6 868 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CAVIN3Q969G5 261 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 RELTQ969Z4 430 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ANKRD9Q96BM1 317 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SPACA9Q96E40 222 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 APOPT1Q96IL0 206 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SIGLEC12Q96PQ1 595 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CDK15Q96Q40 435 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 RASL10BQ96S79 203 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CSF3RQ99062 836 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 MRPL1Q9BYD6 325 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 TXLNGYQ9BZA5 131 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 BRINP2Q9C0B6 783 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 OR10A5Q9H207 317 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 TP63Q9H3D4 680 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CXorf21Q9HAI6 301 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 IL1RL2Q9HB29 575 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 C3orf14Q9HBI5 128 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ATAD3AQ9NVI7 634 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF358Q9NW07 568 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 OXSMQ9NWU1 459 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 MKS1Q9NXB0 559 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 QPCTLQ9NXS2 382 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 TMEM216Q9P0N5 145 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ERRFI1Q9UJM3 462 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 UTS2RQ9UKP6 389 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 NPIPA1Q9UND3 350 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 ASB1Q9Y576 335 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 PCDHA9Q9Y5H5 950 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 KLF2Q9Y5W3 355 aaPredicted RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 CCDC168Q8NDH2 2452 aa5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 TNRC6AQ8NDV7 1962 aaKnown RBP5.2□□□□□ -1.58
CLSTN3-215ENST00000544584 NIPBLQ6KC79 2804 aaeCLIP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms