RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 C13orf42A0A1B0GVH6 325 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 TP53I11O14683 189 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 MITFO75030 526 aaPredicted RBP12.21□□□□□ -0.46
CHD4-211ENST00000544484 RHCEP18577 417 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 GSTM4Q03013 218 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 NIPAL1Q6NVV3 410 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 TUBA3EQ6PEY2 450 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 GID4Q8IVV7 300 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 NAGSQ8N159 534 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 RPLP0P6Q8NHW5 317 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 NETO1Q8TDF5 533 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 NXPE2Q96DL1 559 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 SORBS1Q9BX66 1292 aaKnown RBP12.21□□□□□ -0.46
CHD4-211ENST00000544484 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 S100A6P06703 90 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 TAS2R43P59537 309 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 ARPC4P59998 168 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 MANEALQ5VSG8 457 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 THOC7Q6I9Y2 204 aaKnown RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 STRADBQ9C0K7 418 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 SMOXQ9NWM0 555 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 FAM118AQ9NWS6 357 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 CDH10Q9Y6N8 788 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 TRAV6A0A075B6T7 132 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 HNRNPKP61978 463 aaKnown RBP eCLIP12.2□□□□□ -0.468e-7■■■■■ 27.2
CHD4-211ENST00000544484 GRIK2Q13002 908 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 SLC37A3Q8NCC5 494 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 MNTQ99583 582 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 C12orf4Q9NQ89 552 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 MEMO1Q9Y316 297 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 EDIL3O43854 480 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 KDM4BO94953 1096 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 GGT1P19440 569 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 NR0B1P51843 470 aaKnown RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 SEC23BQ15437 767 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 PIGGQ5H8A4 983 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 LRFN4Q6PJG9 635 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 WDR20Q8TBZ3 569 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 MED11Q9P086 117 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 HTR3EA5X5Y0 456 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 NPIPA2E9PIF3 369 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 NPIPA3F8WFD2 350 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 S1PR1P21453 382 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 DUSP3P51452 185 aaPredicted RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 TUBA3CQ13748 450 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 GRHL2Q6ISB3 625 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 SLC44A3Q8N4M1 653 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 PSD4Q8NDX1 1056 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 CREB3L4Q8TEY5 395 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 NECTIN4Q96NY8 510 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 POLE4Q9NR33 117 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 NOP16Q9Y3C1 178 aaKnown RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 TEX46H3BTG2 121 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 HSPA12AO43301 675 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 HNRNPA2B1P22626 353 aaKnown RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 MAPK3P27361 379 aaPredicted RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 CERS1P27544 350 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 MS4A2Q01362 244 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 TRNP1Q6NT89 227 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 CCDC80Q76M96 950 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 FAM46AQ96IP4 442 aaKnown RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 SLC6A15Q9H2J7 730 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 C8orf33Q9H7E9 229 aaPredicted RBP12.2□□□□□ -0.46
CHD4-211ENST00000544484 ASB6Q9NWX5 421 aa12.2□□□□□ -0.46
CHD4-211ENST00000544484 ATF6P18850 670 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 GJA8P48165 433 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 CLCN2P51788 898 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 S100A10P60903 97 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 RAET1LQ5VY80 246 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 CASTOR1Q8WTX7 329 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 THAP4Q8WY91 577 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 FGF13Q92913 245 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 NEIL2Q969S2 332 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 TMEM184CQ9NVA4 438 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 EXTL2Q9UBQ6 330 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 MGAT4AQ9UM21 535 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 GPR52Q9Y2T5 361 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 DRGXA6NNA5 263 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 H2BFMP0C1H6 154 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 PRKCAP17252 672 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 SUOXP51687 545 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 CTSCP53634 463 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 GNG2P59768 71 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 MOGQ16653 247 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 C22orf42Q6IC83 251 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 SHFQ7M4L6 423 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 CEACAM19Q7Z692 300 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 INO80EQ8NBZ0 244 aaPredicted RBP12.19□□□□□ -0.46
CHD4-211ENST00000544484 OR5T2Q8NGG2 359 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 PRSS21Q9Y6M0 314 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 CD8B2A6NJW9 211 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 L7N2F9 121 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 CD8BP10966 210 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 ETV4P43268 484 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 CAPZA1P52907 286 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 VAMP2P63027 116 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 OCLNQ16625 522 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 KCTD9Q7L273 389 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 KLBQ86Z14 1044 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms