RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 MAGEA4P43358 317 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 MASP1P48740 699 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 ALDH18A1P54886 795 aaKnown RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 NRG3P56975 720 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 DUSP8Q13202 625 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 CUL3Q13618 768 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 SNTB1Q13884 538 aaKnown RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 ACAP2Q15057 778 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 RPS6KA2Q15349 733 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 KLC3Q6P597 504 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 PACS2Q86VP3 889 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 PM20D2Q8IYS1 436 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 SPATA4Q8NEY3 305 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 GOT1L1Q8NHS2 421 aaPredicted RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 KCTD4Q8WVF5 259 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 RMND5BQ96G75 393 aaPredicted RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 GPATCH1Q9BRR8 931 aaKnown RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 DDX31Q9H8H2 851 aaKnown RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 IPPKQ9H8X2 491 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 PROK2Q9HC23 129 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 CCM2LQ9NUG4 571 aaPredicted RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 GRHL1Q9NZI5 618 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 MTRF1LQ9UGC7 380 aaKnown RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 ASB4Q9Y574 426 aa15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 TNPO3Q9Y5L0 923 aaKnown RBP15.99■□□□□ 0.15
PPP1CA-210ENST00000542876 WASHC1A8K0Z3 465 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 TMPRSS11DO60235 418 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 KRT38O76015 456 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 SNX4O95219 450 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 AIFM1O95831 613 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 EPPINO95925 133 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 IL2RAP01589 272 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 MTHFD2P13995 350 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 DNASE1P24855 282 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 PIK3R1P27986 724 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 BSGP35613 385 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 ASCL1P50553 236 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 PPP2R2AP63151 447 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 GTF2H2Q13888 395 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 OR52E8Q6IFG1 317 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 MRM1Q6IN84 353 aaKnown RBP15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 GTF2H2CQ6P1K8 395 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 LACC1Q8IV20 430 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 GALNT12Q8IXK2 581 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 ATP6V1E2Q96A05 226 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 TP53INP1Q96A56 240 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 SECISBP2Q96T21 854 aaKnown RBP15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 ZNF717Q9BY31 904 aaPredicted RBP15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 RAB17Q9H0T7 212 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 PSD3Q9NYI0 1048 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 CRIM1Q9NZV1 1036 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 ST6GALNAC2Q9UJ37 374 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 FOXD3Q9UJU5 478 aaPredicted RBP15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 NF1P21359 2839 aa15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 ANKHD1Q8IWZ3 2542 aaKnown RBP15.98■□□□□ 0.15
PPP1CA-210ENST00000542876 ITPR3Q14573 2671 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 FAM221AA4D161 298 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 FOXE1O00358 373 aaPredicted RBP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 TRIM3O75382 744 aaPredicted RBP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 KRT15P19012 456 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 SSTR4P31391 388 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 FBXW4P57775 412 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 IRF9Q00978 393 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 PCBP2Q15366 365 aaKnown RBP eCLIP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 TOMM20Q15388 145 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 ACSF3Q4G176 576 aaPredicted RBP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 FLYWCH1Q4VC44 716 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 MROH9Q5TGP6 573 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 FBXW10Q5XX13 1052 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 TMEM64Q6YI46 380 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 GOLGA7Q7Z5G4 137 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 CENPLQ8N0S6 344 aaPredicted RBP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 TNIP2Q8NFZ5 429 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 FBXO25Q8TCJ0 367 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 FAM222BQ8WU58 562 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 RNASE6Q93091 150 aaKnown RBP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 MRRFQ96E11 262 aaKnown RBP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 HSPBAP1Q96EW2 488 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 RILPQ96NA2 401 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 SERPINI1Q99574 410 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 TIMP4Q99727 224 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 TMUB1Q9BVT8 246 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 CXXC4Q9H2H0 198 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 CXorf21Q9HAI6 301 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 RASSF1Q9NS23 344 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 CPSF2Q9P2I0 782 aaKnown RBP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 ZNF629Q9UEG4 869 aaPredicted RBP15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 RNF11Q9Y3C5 154 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 NPFFR2Q9Y5X5 522 aa15.97■□□□□ 0.15
PPP1CA-210ENST00000542876 CLDN9O95484 217 aa15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 GBAP04062 536 aa15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 C2P06681 752 aa15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 TIMP3P35625 211 aa15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 CDK9P50750 372 aaKnown RBP15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 NEK2P51955 445 aa15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 CRYZQ08257 329 aaKnown RBP15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 C2orf54Q08AI8 447 aa15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 CEBPEQ15744 281 aa15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 UAP1Q16222 522 aaPredicted RBP15.96■□□□□ 0.15
PPP1CA-210ENST00000542876 KRTAP21-3Q3LHN1 58 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms