RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TMEM63AO94886 807 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 HLA-DQA2P01906 255 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 CD63P08962 238 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 HBQ1P09105 142 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 PGAM1P18669 254 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 PRPH2P23942 346 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 OAS2P29728 719 aaKnown RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 HSD17B2P37059 387 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 SKIV2L2P42285 1042 aaKnown RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 ARCN1P48444 511 aaKnown RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 RAB28P51157 221 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 KPNA2P52292 529 aaKnown RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 IRX1P78414 480 aaPredicted RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 MPP1Q00013 466 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 ILF2Q12905 390 aaKnown RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 CALCOCO2Q13137 446 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 SEMA3AQ14563 771 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 KIR2DS3Q14952 304 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 NAA25Q14CX7 972 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 TGIF1Q15583 401 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 KYNUQ16719 465 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 TYSND1Q2T9J0 566 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 GXYLT1Q4G148 440 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 ZNF658BQ4V348 819 aaPredicted RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 RNASEH2BQ5TBB1 312 aaKnown RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 ANKRD22Q5VYY1 191 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 LRRC8EQ6NSJ5 796 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 LDLRAD3Q86YD5 345 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 DCUN1D3Q8IWE4 304 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 C10orf67Q8IYJ2 551 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 Q8N1X5 172 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 OR5AR1Q8NGP9 310 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 DENND1AQ8TEH3 1009 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 LRRC39Q96DD0 335 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 RNF125Q96EQ8 232 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 SNF8Q96H20 258 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 ELMO2Q96JJ3 720 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 CATSPER2Q96P56 530 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 EBNA1BP2Q99848 306 aaKnown RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 HGH1Q9BTY7 390 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 NPLQ9BXD5 320 aaPredicted RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 P2RY12Q9H244 342 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 GPN2Q9H9Y4 310 aaPredicted RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 APMAPQ9HDC9 416 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 PPANQ9NQ55 473 aaKnown RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 FAM114A2Q9NRY5 505 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 FGF21Q9NSA1 209 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 MARCH4Q9P2E8 410 aaPredicted RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 PILRAQ9UKJ1 303 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 ADAM21Q9UKJ8 722 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 POMT2Q9UKY4 750 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 HSF4Q9ULV5 492 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 BTRCQ9Y297 605 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 PIKFYVEQ9Y2I7 2098 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 A0A0J9YY10 115 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ZCWPW2A0A1B0GU75 182 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 PABPN1LA6NDY0 278 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 TMEM247A6NEH6 219 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 E7EQ34 232 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 BTN3A3O00478 584 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 MAP2K7O14733 419 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 RASGRF2O14827 1237 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 POLR3GO15318 223 aaPredicted RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ZBTB14O43829 449 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 VPS26AO75436 327 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 SCRG1O75711 98 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 KIAA0754O94854 1291 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CATP04040 527 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 RFPL3SP0C7P2 107 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 MPC1LP0DKB6 136 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CBSLP0DN79 551 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ENO3P13929 434 aaPredicted RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 FOLR1P15328 257 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CYP2A7P20853 494 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CD9P21926 228 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ATP5DP30049 168 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CBSP35520 551 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 DLSTP36957 453 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CASP2P42575 452 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 MAGEA3P43357 314 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 RGS4P49798 205 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 RPS15P62841 145 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 TUBA4AP68366 448 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CAV1Q03135 178 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CKAP4Q07065 602 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 BAK1Q16611 211 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 SLC5A12Q1EHB4 618 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 HSP90AA5PQ58FG0 334 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 FCRLBQ6BAA4 426 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ZNF470Q6ECI4 717 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 SLC22A25Q6T423 547 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 SPESP1Q6UW49 350 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 NEK10Q6ZWH5 1172 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CENPUQ71F23 418 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 GALNT7Q86SF2 657 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 VASH2Q86V25 355 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 KCNMB4Q86W47 210 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ARMC8Q8IUR7 673 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 TMEM126BQ8IUX1 230 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ADGRF3Q8IZF5 1079 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms