RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ZNF416Q9BWM5 594 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 PITPNM3Q9BZ71 974 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 NMNAT2Q9BZQ4 307 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 SIRPDQ9H106 197 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 ROPN1Q9HAT0 212 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 UBE2TQ9NPD8 197 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 HPS4Q9NQG7 708 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 TAAR2Q9P1P5 351 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF319Q9P2F9 582 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 BCAP29Q9UHQ4 241 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 XPO7Q9UIA9 1087 aaKnown RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 RABL2BQ9UNT1 228 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 SATB2Q9UPW6 733 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 SELENOKQ9Y6D0 94 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 KIAA0100Q14667 2235 aaKnown RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 ANKRD26Q9UPS8 1709 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 SMCHD1A6NHR9 2005 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF732B4DXR9 585 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 F8WDY8 70 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 LGALS8O00214 317 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 E2F3O00716 465 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CDK2AP2O75956 126 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 EPOP01588 193 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 PCCBP05166 539 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 APRTP07741 180 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 UMODP07911 640 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 LYNP07948 512 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 RRASP10301 218 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 ODC1P11926 461 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CYP3A5P20815 502 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CYP2F1P24903 491 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 PSMA5P28066 241 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CEACAM8P31997 349 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 DUTP33316 252 aaKnown RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 NF2P35240 595 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CLCN4P51793 760 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF132P52740 706 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 GABPAQ06546 454 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 ARL16Q0P5N6 197 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 PDZK1IP1Q13113 114 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 MPPE1Q53F39 396 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 SLC25A24Q6NUK1 477 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CWC27Q6UX04 472 aaKnown RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 GSG1LQ6UXU4 331 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CDHR3Q6ZTQ4 885 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 C9orf139Q6ZV77 190 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 ANO5Q75V66 913 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 BNIPLQ7Z465 357 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 TRMT11Q7Z4G4 463 aaKnown RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CPEB2Q7Z5Q1 589 aaKnown RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF573Q86YE8 665 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 FAM89BQ8N5H3 189 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 FAM71CQ8NEG0 241 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 ALG14Q96F25 216 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 TAAR6Q96RI8 345 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 TXN2Q99757 166 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 NKX3-1Q99801 234 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 FICDQ9BVA6 458 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 S100A14Q9HCY8 104 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 PALMDQ9NP74 551 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 FAM212BQ9NTI7 297 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 DDX28Q9NUL7 540 aaKnown RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 MIS18AQ9NYP9 233 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 GTSE1Q9NYZ3 720 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 CNOT2Q9NZN8 540 aaKnown RBP3.75□□□□□ -1.81
SNHG1-217ENST00000541578 HACD3Q9P035 362 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 FBXL4Q9UKA2 621 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 PILRBQ9UKJ0 227 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 WDR37Q9Y2I8 494 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 NCAPD2Q15021 1401 aa3.75□□□□□ -1.81
SNHG1-217ENST00000541578 TRBV4-1A0A0J9YWV2 114 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 TRBV5-5A0A0J9YX44 114 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 A0A0U1RRA0 63 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 FAM230AA0A1W2PPH8 454 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CLRN2A0PK11 232 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 ANKRD30BLA7E2S9 258 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 SNURFLB1AK76 121 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 SLC1A7O00341 560 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 KLF11O14901 512 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 MAPK13O15264 365 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 ECE2O60344 883 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CIDEAO60543 219 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 LMX1BO60663 402 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CYTIPO60759 359 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 VPS26AO75436 327 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 BBOX1O75936 387 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 IGHDP01880 384 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 KRT6BP04259 564 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CT45A8P0DMV1 189 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CT45A9P0DMV2 189 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 IGHV4-38-2P0DP08 117 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 EPB41P11171 864 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 AADACP22760 399 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 ACKR3P25106 362 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 RPS12P25398 132 aaKnown RBP3.74□□□□□ -1.81
SNHG1-217ENST00000541578 TMOD1P28289 359 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 GJB2P29033 226 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 CDKN1AP38936 164 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 MAGEA11P43364 429 aa3.74□□□□□ -1.81
SNHG1-217ENST00000541578 TNFRSF4P43489 277 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms