RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TMEM171Q8WVE6 324 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ROBO4Q8WZ75 1007 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PEX13Q92968 403 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 NCLNQ969V3 563 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 FOXRED1Q96CU9 486 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SCYL1Q96KG9 808 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 RASL10BQ96S79 203 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PKP4Q99569 1192 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 TIMP4Q99727 224 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 WDR83Q9BRX9 315 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SFXN3Q9BWM7 321 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PACSIN1Q9BY11 444 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 REG4Q9BYZ8 158 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SLC6A15Q9H2J7 730 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PIGMQ9H3S5 423 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 CXorf56Q9H5V9 222 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF703Q9H7S9 590 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 CALHM2Q9HA72 323 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SEMA4BQ9NPR2 832 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 NECTIN3Q9NQS3 549 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 GALNT8Q9NY28 637 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 C6orf203Q9P0P8 240 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 NTMQ9P121 344 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SLC2A6Q9UGQ3 507 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ANAPC5Q9UJX4 755 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 BOKQ9UMX3 212 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 R3HDM2Q9Y2K5 976 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 MMACHCQ9Y4U1 282 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ROS1P08922 2347 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 USF3Q68DE3 2245 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 C15orf38-AP3S2A0A0A6YYH1 394 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 H3BMM5 538 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 WWP2O00308 870 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 SPOPO43791 374 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 LCMT2O60294 686 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CEP104O60308 925 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 NDUFS3O75489 264 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 GAS8O95995 478 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 RFPL3SP0C7P2 107 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 TMIGD3P0DMS9 266 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CCL3P10147 92 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 RBP3P10745 1247 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 RNH1P13489 461 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 COMTP21964 271 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CRYGSP22914 178 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ADRA1DP25100 572 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 COILP38432 576 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 SKIV2L2P42285 1042 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CPA2P48052 419 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 AGFG1P52594 562 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 DIO3P55073 304 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ATP5J2P56134 94 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 EIF3EP60228 445 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 OLR1P78380 273 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 PRAMEP78395 509 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 IL13RA1P78552 427 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CRYZQ08257 329 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CDH17Q12864 832 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 VEZF1Q14119 521 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 SLC18A3Q16572 532 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 STX1AQ16623 288 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 PHKG1Q16816 387 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CLEC12BQ2HXU8 276 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 KLHL38Q2WGJ6 581 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 P3H1Q32P28 736 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 DEFB134Q4QY38 66 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ACSBG2Q5FVE4 666 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 RNF187Q5TA31 235 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CCDC181Q5TID7 509 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 DARS2Q6PI48 645 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 HSDL2Q6YN16 418 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 LINC00523Q86TU6 105 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 MPP5Q8N3R9 675 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 TMEM132CQ8N3T6 1108 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF441Q8N8Z8 693 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 PPFIBP2Q8ND30 876 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 MAPK1IP1LQ8NDC0 245 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF740Q8NDX6 193 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 NUDT10Q8NFP7 164 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 OR5L2Q8NGL0 311 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 OR8K3Q8NH51 312 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ACTL9Q8TC94 416 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 PAQR8Q8TEZ7 354 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 IQCDQ96DY2 449 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 PIK3IP1Q96FE7 263 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 NUDT11Q96G61 164 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 PDLIM2Q96JY6 352 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 C16orf92Q96LL3 132 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 C20orf173Q96LM9 149 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ZFP3Q96NJ6 502 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 HEMGNQ9BXL5 484 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 PCBD2Q9H0N5 130 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ZMAT4Q9H898 229 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 L2HGDHQ9H9P8 463 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 LIN28AQ9H9Z2 209 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 LRTM1Q9HBL6 345 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 SH2D2AQ9NP31 389 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 EMC7Q9NPA0 242 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CCDC177Q9NQR7 707 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ABCF3Q9NUQ8 709 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms