RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PDE9AO76083 593 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 B3GALT4O96024 378 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 HRGP04196 525 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 SYPP08247 313 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 NT5EP21589 574 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 HLA-DMAP28067 261 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 RPL4P36578 427 aaKnown RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 PGDP52209 483 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 SERINC3Q13530 473 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MS4A13Q5J8X5 152 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PDZK1Q5T2W1 519 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TIGD3Q6B0B8 471 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CRTC1Q6UUV9 634 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 SBSNQ6UWP8 590 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ARSKQ6UWY0 536 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 USP53Q70EK8 1073 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TRIM46Q7Z4K8 759 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 LIX1LQ8IVB5 337 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PIANPQ8IYJ0 282 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 LINC00518Q8N0U6 118 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 BMPERQ8N8U9 685 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 NLGN4YQ8NFZ3 816 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 OR10G2Q8NGC3 310 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 METTL21AQ8WXB1 218 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PIP5K1AQ99755 562 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CCM2Q9BSQ5 444 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 C11orf54Q9H0W9 315 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 NSUN3Q9H649 340 aaKnown RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 ELL3Q9HB65 397 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 FANCFQ9NPI8 374 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CTPS2Q9NRF8 586 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MS4A12Q9NXJ0 267 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ZNF226Q9NYT6 803 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 KLHL21Q9UJP4 597 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MAPRE3Q9UPY8 281 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MRPS33Q9Y291 106 aaKnown RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 INSL5Q9Y5Q6 135 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ATG2AQ2TAZ0 1938 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TRAV20A0A0B4J274 112 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 FADS2P1A8MWK0 482 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SAP18O00422 153 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 DLL1O00548 723 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SHOXO15266 292 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 OR2B3O76000 313 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 GJB5O95377 273 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 IFNA14P01570 189 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 RHOP08100 348 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ANXA8P13928 327 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ENGP17813 658 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 PAICSP22234 425 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 PTPN6P29350 595 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CBX5P45973 191 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 HAAOP46952 286 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 GZMKP49863 264 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 MANFP55145 182 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 POLR2GP62487 172 aaKnown RBP eCLIP4.98□□□□□ -1.61
PROM1-220ENST00000540805 RGS1Q08116 209 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 MTAPQ13126 283 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 MFSD13AQ14CX5 517 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 LRRC66Q68CR7 880 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 OR4F3Q6IEY1 312 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TMEM81Q6P7N7 255 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 C19orf48Q6RUI8 117 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 MSANTD1Q6ZTZ1 278 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SERPINA9Q86WD7 417 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ATCAYQ86WG3 371 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 B3GNT7Q8NFL0 401 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SLC5A11Q8WWX8 675 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CLP1Q92989 425 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 REPS1Q96D71 796 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 RBM18Q96H35 190 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 IGSF21Q96ID5 467 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 QRFPRQ96P65 431 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TRIB3Q96RU7 358 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 MTERF1Q99551 399 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 FEVQ99581 238 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 BTBD1Q9H0C5 482 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SNTG1Q9NSN8 517 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 LHX6Q9UPM6 363 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TLR6Q9Y2C9 796 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 DLGAP4Q9Y2H0 992 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 PCDHGA2Q9Y5H1 932 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CLCA3PQ9Y6N3 262 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TEX51A0A1B0GUA7 166 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SLC35F4A4IF30 521 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TOR1AO14656 332 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ADAMDEC1O15204 470 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 LRRTM2O43300 516 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SUV39H1O43463 412 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SGTAO43765 313 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 PRAMEF11O60813 436 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ZNF254O75437 659 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 C1QBP02746 253 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 C1QCP02747 245 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 PROS1P07225 676 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 EBLN1P0CF75 366 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ADH5P11766 374 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SPAM1P38567 509 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 RPS19P39019 145 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms