RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 AKAP5P24588 427 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 GIFP27352 417 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 FGF9P31371 208 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 CASP6P55212 293 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 PPIGQ13427 754 aaKnown RBP eCLIP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 DOC2BQ14184 412 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 TAF1CQ15572 869 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 USP39Q53GS9 565 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF789Q5FWF6 425 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 TCEAL6Q6IPX3 200 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 CBLL1Q75N03 491 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 VTCN1Q7Z7D3 282 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM131BQ86XD5 332 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 GPR65Q8IYL9 337 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 NAGSQ8N159 534 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 SYNPOQ8N3V7 929 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 TOMM5Q8N4H5 51 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC5A8Q8N695 610 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 RTL3Q8N8U3 475 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 STK35Q8TDR2 534 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 PIH1D2Q8WWB5 315 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 TADA1Q96BN2 335 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ABHD16BQ9H3Z7 469 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 MINDY3Q9H8M7 445 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 RNF146Q9NTX7 359 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 RPL36Q9Y3U8 105 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 DENND4AQ7Z401 1863 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 TMEM218A2RU14 115 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 C9orf170A2RU37 121 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 AGAP14A8MT82 685 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 C5orf58C9J3I9 102 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 RFXAPO00287 272 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 TCAPO15273 167 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 MID1O15344 667 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 CACNG3O60359 315 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 KERAO60938 352 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 ITGA10O75578 1167 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 RB1P06400 928 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 NPR2P20594 1047 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 RBP2P50120 134 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 CDKN2DP55273 166 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 FABP9Q0Z7S8 132 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 PTGR1Q14914 329 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 OR4D1Q15615 310 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SV2CQ496J9 727 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SGO1Q5FBB7 561 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SERPINA11Q86U17 422 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SPICQ8N5J4 248 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM46DQ8NEK8 389 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SELENOMQ8WWX9 145 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 TMEM134Q9H6X4 195 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC25A19Q9HC21 320 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 STOX2Q9P2F5 926 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 NFKBIL1Q9UBC1 381 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 EIF2B4Q9UI10 523 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 CA5BQ9Y2D0 317 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 TNS1Q9HBL0 1735 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 PSMD9O00233 223 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 CLDN4O14493 209 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 DCLK1O15075 740 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 BRINP1O60477 761 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 PEX10O60683 326 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 FZD7O75084 574 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 CDC123O75794 336 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SC5DO75845 299 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 IFNGP01579 166 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 JCHAINP01591 159 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 ALPIP09923 528 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 RD3LP0DJH9 198 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 MAPK3P27361 379 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 PITPNBP48739 271 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 CAV3P56539 151 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SREBF2Q12772 1141 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 COTL1Q14019 142 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 HABP2Q14520 560 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 PPA1Q15181 289 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 PTGES3Q15185 160 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 GOLGA7BQ2TAP0 167 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC39A12Q504Y0 691 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SPANXN4Q5MJ08 99 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 LRIF1Q5T3J3 769 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM111BQ6SJ93 734 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 IL27RAQ6UWB1 636 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 REC114Q7Z4M0 266 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 PLEKHH3Q7Z736 793 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 LRRC28Q86X40 367 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC39A7Q92504 469 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 C1QTNF3Q9BXJ4 246 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC38A1Q9H2H9 487 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 NSUN3Q9H649 340 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 AGO3Q9H9G7 860 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 RNF122Q9H9V4 155 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 POPDC3Q9HBV1 291 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 JPH1Q9HDC5 661 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 ZDHHC4Q9NPG8 344 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 RPS6KB2Q9UBS0 482 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 HACL1Q9UJ83 578 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 SPIN1Q9Y657 262 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms