RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 LGR4Q9BXB1 951 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 KCNK12Q9HB15 430 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 ACSS1Q9NUB1 689 aaPredicted RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 TCF20Q9UGU0 1960 aaKnown RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 WASHC1A8K0Z3 465 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 CACNB4O00305 520 aaPredicted RBP13.54□□□□□ -0.24
USP44-203ENST00000537435 TLX2O43763 284 aaPredicted RBP13.54□□□□□ -0.24
USP44-203ENST00000537435 DYRK3O43781 588 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 PRKYO43930 277 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 LCMT2O60294 686 aaKnown RBP13.54□□□□□ -0.24
USP44-203ENST00000537435 SLITRK5O94991 958 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 RPN2P04844 631 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 SERPIND1P05546 499 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 CTNNB1P35222 781 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 GSTM5P46439 218 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 ZNF234Q14588 700 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 OCLNQ16625 522 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 TMEM53Q6P2H8 277 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 WASH2PQ6VEQ5 465 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 GDPGP1Q6ZNW5 385 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 HMGN2P46Q86SG4 172 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 OR8H2Q8N162 312 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 TBC1D19Q8N5T2 526 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 FLCNQ8NFG4 579 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 ST13P5Q8NFI4 369 aaPredicted RBP13.54□□□□□ -0.24
USP44-203ENST00000537435 PROKR2Q8NFJ6 384 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 RACGAP1Q9H0H5 632 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 GLIPR2Q9H4G4 154 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 ZDHHC4Q9NPG8 344 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 STUB1Q9UNE7 303 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 OTOL1A6NHN0 477 aaPredicted RBP13.54□□□□□ -0.24
USP44-203ENST00000537435 MYL12BO14950 172 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 CYP7B1O75881 506 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 GSTT2P0CG29 244 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 GSTT2BP0CG30 244 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 HSD17B2P37059 387 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.24
USP44-203ENST00000537435 CDK3Q00526 305 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 METRNLQ641Q3 311 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 TMC5Q6UXY8 1006 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 RTL10Q7L3V2 364 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 ADCK2Q7Z695 626 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 FNDC11Q9BVV2 318 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 PCBD2Q9H0N5 130 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 SNTG1Q9NSN8 517 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 ZCCHC3Q9NUD5 404 aaKnown RBP13.54□□□□□ -0.24
USP44-203ENST00000537435 NDUFB11Q9NX14 153 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 INSL6Q9Y581 213 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 PTPRSQ13332 1948 aa13.54□□□□□ -0.24
USP44-203ENST00000537435 A0A1W2PRQ8 180 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 ZNF670-ZNF695F2Z2N8 137 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 H3BQ06 376 aaPredicted RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 MMP11P24347 488 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 P2RY2P41231 377 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 GJA8P48165 433 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 PCYT1AP49585 367 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 RORCP51449 518 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 NKX2-5P52952 324 aaPredicted RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 ALDH6A1Q02252 535 aaKnown RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 MLLT11Q13015 90 aaPredicted RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 FAM46CQ5VWP2 391 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 LIPKQ5VXJ0 399 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 OR4C11Q6IEV9 310 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 ADAMTSL4Q6UY14 1074 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 ZER1Q7Z7L7 766 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 IL17RDQ8NFM7 739 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 GPR151Q8TDV0 419 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 ASB15Q8WXK1 588 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 ZNF764Q96H86 408 aaPredicted RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 AMDHD1Q96NU7 426 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 DPH7Q9BTV6 452 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 DDX31Q9H8H2 851 aaKnown RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 ADAM29Q9UKF5 820 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 HCN2Q9UL51 889 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 TBC1D24Q9ULP9 559 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 TRAPPC4Q9Y296 219 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 KIF26AQ9ULI4 1882 aaPredicted RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 ANTXRLA6NF34 631 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 PRKRAO75569 313 aaKnown RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 HNRNPA1P09651 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP44-203ENST00000537435 PPP2R1BP30154 601 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 PTGER1P34995 402 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 SSR2P43308 183 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 VEGFBP49765 207 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 CLCNKAP51800 687 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 PRKAG1P54619 331 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 CSNK1G2P78368 415 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 C1DQ13901 141 aaKnown RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 GINS1Q14691 196 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 MLC1Q15049 377 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 NDUFAF5Q5TEU4 345 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 IQCHQ86VS3 1027 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 PHC2Q8IXK0 858 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 FAM26EQ8N5C1 309 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 LINC01555Q8NAE3 123 aa13.53□□□□□ -0.24
USP44-203ENST00000537435 TP53I13Q8NBR0 393 aaPredicted RBP13.53□□□□□ -0.24
USP44-203ENST00000537435 OR4K5Q8NGD3 323 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms