RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 HEPACAMQ14CZ8 416 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 ATP6AP1LQ52LC2 224 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 TRMT12Q53H54 448 aaKnown RBP16.6■□□□□ 0.25
DDX55-204ENST00000536079 IL23RQ5VWK5 629 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 ATG16L1Q676U5 607 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 HSDL2Q6YN16 418 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 WDR75Q8IWA0 830 aaKnown RBP16.6■□□□□ 0.25
DDX55-204ENST00000536079 LIX1Q8N485 282 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 PNPLA2Q96AD5 504 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 PELOQ9BRX2 385 aaKnown RBP16.6■□□□□ 0.25
DDX55-204ENST00000536079 HES7Q9BYE0 225 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 SLC35C2Q9NQQ7 365 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 MAT2BQ9NZL9 334 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 ANAPC2Q9UJX6 822 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 B3GNT3Q9Y2A9 372 aa16.6■□□□□ 0.25
DDX55-204ENST00000536079 SPTA1P02549 2419 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 WWP2O00308 870 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 SDHDO14521 159 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 KLF11O14901 512 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 NME6O75414 186 aaPredicted RBP16.59■□□□□ 0.25
DDX55-204ENST00000536079 PCSK2P16519 638 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 CASRP41180 1078 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 GSTM5P46439 218 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 MRPS35P82673 323 aaKnown RBP16.59■□□□□ 0.25
DDX55-204ENST00000536079 FUT7Q11130 342 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 EXOSC7Q15024 291 aaKnown RBP16.59■□□□□ 0.25
DDX55-204ENST00000536079 CEBPEQ15744 281 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 SPINK14Q6IE38 97 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 PRICKLE2Q7Z3G6 844 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 HPS6Q86YV9 775 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 TRIM42Q8IWZ5 723 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 GALNT12Q8IXK2 581 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 LGI4Q8N135 537 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 LRRC25Q8N386 305 aaPredicted RBP16.59■□□□□ 0.25
DDX55-204ENST00000536079 ZNF615Q8N8J6 731 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 FNDC5Q8NAU1 212 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 OR9A2Q8NGT5 310 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 TM9SF4Q92544 642 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 KAT2AQ92830 837 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 CIDECQ96AQ7 238 aaPredicted RBP16.59■□□□□ 0.25
DDX55-204ENST00000536079 CTHRC1Q96CG8 243 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 RNF32Q9H0A6 362 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 MEAF6Q9HAF1 191 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 SLCO1B3Q9NPD5 702 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 EHD3Q9NZN3 535 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 MYOTQ9UBF9 498 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 ZNF639Q9UID6 485 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 PSME2Q9UL46 239 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 DTX4Q9Y2E6 619 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 TMED5Q9Y3A6 229 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 PCDHGA10Q9Y5H3 936 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 ZNF780BQ9Y6R6 833 aa16.59■□□□□ 0.25
DDX55-204ENST00000536079 DYTNA2CJ06 578 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 OR5H15A6NDH6 313 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 MYO1GB0I1T2 1018 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 ZNF195O14628 629 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 ITGA10O75578 1167 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 OR2J2O76002 312 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 SNUPNO95149 360 aaKnown RBP16.58■□□□□ 0.24
DDX55-204ENST00000536079 CBX7O95931 251 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 G6PDP11413 515 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 DIO3P55073 304 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 SRSF11Q05519 484 aaKnown RBP16.58■□□□□ 0.24
DDX55-204ENST00000536079 MAP4K2Q12851 820 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 PTGR1Q14914 329 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 ZNF169Q14929 603 aaPredicted RBP16.58■□□□□ 0.24
DDX55-204ENST00000536079 ZNF628Q5EBL2 1059 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 IKBIPQ70UQ0 350 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 MDS2Q8NDY4 140 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 C7orf57Q8NEG2 295 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 TRIM4Q9C037 500 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 BRINP2Q9C0B6 783 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 WDR55Q9H6Y2 383 aaPredicted RBP16.58■□□□□ 0.24
DDX55-204ENST00000536079 PFDN4Q9NQP4 134 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 TAS2R7Q9NYW3 318 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 TEKT2Q9UIF3 430 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 NTNG1Q9Y2I2 539 aa16.58■□□□□ 0.24
DDX55-204ENST00000536079 WBP11Q9Y2W2 641 aaKnown RBP16.58■□□□□ 0.24
DDX55-204ENST00000536079 HEMK1Q9Y5R4 338 aaPredicted RBP16.58■□□□□ 0.24
DDX55-204ENST00000536079 SLC28A2O43868 658 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 NEURL1O76050 574 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 NADKO95544 446 aaPredicted RBP16.57■□□□□ 0.24
DDX55-204ENST00000536079 EFNA1P20827 205 aaPredicted RBP16.57■□□□□ 0.24
DDX55-204ENST00000536079 EMX2Q04743 252 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 PDE7AQ13946 482 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 EBPQ15125 230 aaKnown RBP16.57■□□□□ 0.24
DDX55-204ENST00000536079 OR1C1Q15619 314 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 LARP4Q71RC2 724 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX55-204ENST00000536079 KRTCAP2Q8N6L1 136 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 OR7A2PQ8NGA2 310 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 OR8K3Q8NH51 312 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 RASL10BQ96S79 203 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX55-204ENST00000536079 OR10A5Q9H207 317 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 GLIPR2Q9H4G4 154 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 REEP4Q9H6H4 257 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 MIEF1Q9NQG6 463 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 INTS9Q9NV88 658 aaKnown RBP16.57■□□□□ 0.24
DDX55-204ENST00000536079 COPS7AQ9UBW8 275 aa16.57■□□□□ 0.24
DDX55-204ENST00000536079 ZNF462Q96JM2 2506 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms