RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 ADARP55265 1226 aaKnown RBP3.32□□□□□ -1.88
CCDC7-207ENST00000535327 RIPK4P57078 832 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 GSTO1P78417 241 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 CDKL1Q00532 357 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 MEF2DQ14814 521 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 HEPACAMQ14CZ8 416 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 TRADDQ15628 312 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 STX1AQ16623 288 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 SLC39A12Q504Y0 691 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 CT45A2Q5DJT8 189 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 RFWD3Q6PCD5 774 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 TOM1L2Q6ZVM7 507 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 SIDT2Q8NBJ9 832 aaKnown RBP3.32□□□□□ -1.88
CCDC7-207ENST00000535327 BEST4Q8NFU0 473 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 ST7LQ8TDW4 575 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 BCL2L2Q92843 193 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-207ENST00000535327 MCCC1Q96RQ3 725 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-207ENST00000535327 SPAG8Q99932 426 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-207ENST00000535327 MAPKAP1Q9BPZ7 522 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 NUSAP1Q9BXS6 441 aaKnown RBP3.32□□□□□ -1.88
CCDC7-207ENST00000535327 PNPLA3Q9NST1 481 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 ZCCHC3Q9NUD5 404 aaKnown RBP3.32□□□□□ -1.88
CCDC7-207ENST00000535327 PSORS1C1Q9UIG5 152 aa3.32□□□□□ -1.88
CCDC7-207ENST00000535327 FOXA2Q9Y261 457 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-207ENST00000535327 ANXA9O76027 345 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 GOSR1O95249 250 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 PNPP00491 289 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 CHRNGP07510 517 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 NUDT17P0C025 328 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 TPBGLP0DKB5 382 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 ZNF18P17022 549 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 SPRP35270 261 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-207ENST00000535327 SMSP52788 366 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 MFGE8Q08431 387 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-207ENST00000535327 HSPA14Q0VDF9 509 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 NPRL3Q12980 569 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 KRT31Q15323 416 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 OR1C1Q15619 314 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 SGCBQ16585 318 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 CCDC184Q52MB2 194 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
CCDC7-207ENST00000535327 NEPROQ6NW34 567 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 B3GLCTQ6Y288 498 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 FBXW8Q8N3Y1 598 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 GVQW1Q8N7I0 195 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 ZNRF1Q8ND25 227 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 OR6M1Q8NGM8 313 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 UBTD2Q8WUN7 234 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 FAM46BQ96A09 425 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 EPSTI1Q96J88 318 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 RCHY1Q96PM5 261 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 RAB40CQ96S21 281 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 AGPAT1Q99943 283 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 MRPL9Q9BYD2 267 aaKnown RBP3.31□□□□□ -1.88
CCDC7-207ENST00000535327 WWP1Q9H0M0 922 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 GANQ9H2C0 597 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 MID1IP1Q9NPA3 183 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 GDF3Q9NR23 364 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 ACOXLQ9NUZ1 547 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 MRTO4Q9UKD2 239 aaKnown RBP3.31□□□□□ -1.88
CCDC7-207ENST00000535327 NIP7Q9Y221 180 aaKnown RBP eCLIP3.31□□□□□ -1.88
CCDC7-207ENST00000535327 CPQQ9Y646 472 aa3.31□□□□□ -1.88
CCDC7-207ENST00000535327 CSDE1O75534 798 aaKnown RBP3.3□□□□□ -1.88
CCDC7-207ENST00000535327 CPNE6O95741 557 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 BAG2O95816 211 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 SERPINF2P08697 491 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 MBL2P11226 248 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-207ENST00000535327 CYP3A5P20815 502 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 GLRA1P23415 457 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 OAS2P29728 719 aaKnown RBP3.3□□□□□ -1.88
CCDC7-207ENST00000535327 OR1D2P34982 312 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 SLC12A3P55017 1021 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 GEMP55040 296 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 UCNP55089 124 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 RPS27AP62979 156 aaKnown RBP3.3□□□□□ -1.88
CCDC7-207ENST00000535327 UBXN1Q04323 297 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 CKAP4Q07065 602 aaKnown RBP3.3□□□□□ -1.88
CCDC7-207ENST00000535327 RPA4Q13156 261 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 PCK2Q16822 640 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 MPPE1Q53F39 396 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 Q6ZRG5 221 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 SNX32Q86XE0 403 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 STHQ8IWL8 128 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 KRT35Q92764 455 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 ATP6V0A1Q93050 837 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 GLYATL1Q969I3 302 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 MRPL24Q96A35 216 aaKnown RBP3.3□□□□□ -1.88
CCDC7-207ENST00000535327 C16orf58Q96GQ5 468 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 PCED1BQ96HM7 432 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 DCLRE1BQ9H816 532 aa3.3□□□□□ -1.88
CCDC7-207ENST00000535327 ZSCAN5CA6NGD5 496 aaPredicted RBP3.29□□□□□ -1.88
CCDC7-207ENST00000535327 DDX39AO00148 427 aaKnown RBP3.29□□□□□ -1.88
CCDC7-207ENST00000535327 SLC28A1O00337 649 aa3.29□□□□□ -1.88
CCDC7-207ENST00000535327 EEF2KO00418 725 aaKnown RBP3.29□□□□□ -1.88
CCDC7-207ENST00000535327 CHEK1O14757 476 aa3.29□□□□□ -1.88
CCDC7-207ENST00000535327 HSF2BPO75031 334 aa3.29□□□□□ -1.88
CCDC7-207ENST00000535327 CSO75390 466 aaKnown RBP3.29□□□□□ -1.88
CCDC7-207ENST00000535327 STBD1O95210 358 aa3.29□□□□□ -1.88
CCDC7-207ENST00000535327 FHP07954 510 aa3.29□□□□□ -1.88
CCDC7-207ENST00000535327 HLA-DPA1P20036 260 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms