RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 EPPINO95925 133 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 FAM58BPP0C7Q3 252 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 MTHFD2P13995 350 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 BMP5P22003 454 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 GALNSP34059 522 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 BSGP35613 385 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 ASCL1P50553 236 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 DUSP8Q13202 625 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 HLA-DQA1Q5Y7H0 255 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 MRM1Q6IN84 353 aaKnown RBP15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 TMEM64Q6YI46 380 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 TGIF2LYQ8IUE0 185 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 GOT1L1Q8NHS2 421 aaPredicted RBP15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 KCTD4Q8WVF5 259 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 RMND5BQ96G75 393 aaPredicted RBP15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 ZNF717Q9BY31 904 aaPredicted RBP15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 LIME1Q9H400 295 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 SNX15Q9NRS6 342 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 RASSF1Q9NS23 344 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 GRHL1Q9NZI5 618 aa15.48■□□□□ 0.07
CAPRIN1-216ENST00000534042 DOCK7Q96N67 2140 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 H0YIV9 168 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 RAD51CO43502 376 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 UGDHO60701 494 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 SLC35E2P0CK97 266 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 GFAPP14136 432 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 DNASE1P24855 282 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 SSTR4P31391 388 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 CEACAM8P31997 349 aaPredicted RBP15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 STX2P32856 288 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 PPP2R2AP63151 447 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 CRYZQ08257 329 aaKnown RBP15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 CUL3Q13618 768 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 SETDB1Q15047 1291 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 RPS6KA2Q15349 733 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 SF3B4Q15427 424 aaKnown RBP eCLIP15.47■□□□□ 0.075e-10■□□□□ 8.2
CAPRIN1-216ENST00000534042 CEBPEQ15744 281 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 CPSF6Q16630 551 aaKnown RBP eCLIP15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 PFKFB4Q16877 469 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 ACSF3Q4G176 576 aaPredicted RBP15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 FLYWCH1Q4VC44 716 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 CCDC25Q86WR0 208 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 NAXEQ8NCW5 288 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 TNIP2Q8NFZ5 429 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 RHEBL1Q8TAI7 183 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 FBF1Q8TES7 1133 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 FAM222BQ8WU58 562 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 RNASE6Q93091 150 aaKnown RBP15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 TP53INP1Q96A56 240 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 POM121Q96HA1 1249 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 TIMP4Q99727 224 aa15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 MTRF1LQ9UGC7 380 aaKnown RBP15.47■□□□□ 0.07
CAPRIN1-216ENST00000534042 A0A087X1B8 175 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 A6NNC1 897 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 SNX4O95219 450 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 ACSL3O95573 720 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 AIFM1O95831 613 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 IL2RAP01589 272 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 CLPSP04118 112 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 TIMP3P35625 211 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 MAGEA4P43358 317 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 MASP1P48740 699 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 TMED10P49755 219 aaKnown RBP15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 NEK2P51955 445 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 ALDH18A1P54886 795 aaKnown RBP15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 PLTPP55058 493 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 WNT3P56703 355 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 FBXW4P57775 412 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 NAB1Q13506 487 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 GTF2H2Q13888 395 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 FAM83EQ2M2I3 478 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 FBXL19-AS1Q494R0 122 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 GTF2H2CQ6P1K8 395 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 CCDC91Q7Z6B0 441 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 PACS2Q86VP3 889 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 NUDT13Q86X67 352 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 LACC1Q8IV20 430 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 PM20D2Q8IYS1 436 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 ZNF441Q8N8Z8 693 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 SPPL2AQ8TCT8 520 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 UCN3Q969E3 161 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 RILPQ96NA2 401 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 SH3GL2Q99962 352 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 CXorf21Q9HAI6 301 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 PSD3Q9NYI0 1048 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 ZNF629Q9UEG4 869 aaPredicted RBP15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 FOXD3Q9UJU5 478 aaPredicted RBP15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 PLEKHA6Q9Y2H5 1048 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 NPFFR2Q9Y5X5 522 aa15.46■□□□□ 0.07
CAPRIN1-216ENST00000534042 EXPH5Q8NEV8 1989 aa15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 CCDC189A1A4V9 331 aa15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 LRRC14BA6NHZ5 514 aa15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 C2P06681 752 aa15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 KLK2P20151 261 aa15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 PIK3R1P27986 724 aa15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 CDK9P50750 372 aaKnown RBP15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 NRG3P56975 720 aa15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 RPP38P78345 283 aaKnown RBP15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 IRF9Q00978 393 aa15.45■□□□□ 0.06
CAPRIN1-216ENST00000534042 CAV1Q03135 178 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms