RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SDHCQ99643 169 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 ABCG4Q9H172 646 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 ZNF556Q9HAH1 456 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 A0A1W2PRB8 838 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 OR52A4PA6NMU1 304 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 SUV39H1O43463 412 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 RPN2P04844 631 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 LAMP2P13473 410 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 LIPAP38571 399 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 PIK3CBP42338 1070 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 MAGEA2P43356 314 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 SLC9A3P48764 834 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 ARHGDIAP52565 204 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TIGD3Q6B0B8 471 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 CREB3L2Q70SY1 520 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 GPR155Q7Z3F1 870 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 CAMKMTQ7Z624 323 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 SLC9B2Q86UD5 537 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 CYP4Z1Q86W10 505 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 RNF130Q86XS8 419 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 C11orf65Q8NCR3 313 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 NFKBIDQ8NI38 313 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 AIF1LQ9BQI0 150 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TEX101Q9BY14 249 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 PHPT1Q9NRX4 125 aaPredicted RBP10.97□□□□□ -0.65
USP35-207ENST00000530546 GPATCH2Q9NW75 528 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 MAPRE3Q9UPY8 281 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3DA0A087WVF3 549 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3IA0A087WXS9 549 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3EA0A087X179 549 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3KA0A087X1G2 549 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3FA6NER0 549 aaPredicted RBP10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3LB9A6J9 549 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 PLPP1O14494 284 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 OR1F1O43749 312 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 GPR37L1O60883 481 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 SLITRK5O94991 958 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 ADH1BP00325 375 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 LCKP06239 509 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3HP0C7X1 549 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 IL1RNP18510 177 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 ENPP1P22413 925 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 CRYBA2P53672 197 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 FAPQ12884 760 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TNK1Q13470 666 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 ZNF776Q68DI1 518 aaPredicted RBP10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3GQ6DHY5 549 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3CQ6IPX1 549 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 SHQ1Q6PI26 577 aaKnown RBP10.97□□□□□ -0.65
USP35-207ENST00000530546 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP35-207ENST00000530546 TBC1D3Q8IZP1 549 aaPredicted RBP10.97□□□□□ -0.65
USP35-207ENST00000530546 ATG16L2Q8NAA4 619 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 SMPDL3AQ92484 453 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 MACROD1Q9BQ69 325 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 SLC30A2Q9BRI3 323 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 ROGDIQ9GZN7 287 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 GABARAPL1Q9H0R8 117 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 RANGRFQ9HD47 186 aaPredicted RBP10.97□□□□□ -0.65
USP35-207ENST00000530546 MYNNQ9NPC7 610 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 KIF17Q9P2E2 1029 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 DOCK8Q8NF50 2099 aa10.97□□□□□ -0.65
USP35-207ENST00000530546 K7EQS6 105 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 CPNE3O75131 537 aaKnown RBP10.96□□□□□ -0.65
USP35-207ENST00000530546 PPIBP23284 216 aaKnown RBP10.96□□□□□ -0.65
USP35-207ENST00000530546 OR1E2P47887 323 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 DAPP51397 102 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 CCR8P51685 355 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 MAPK12P53778 367 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 DLX2Q07687 328 aaPredicted RBP10.96□□□□□ -0.65
USP35-207ENST00000530546 COL9A2Q14055 689 aaPredicted RBP10.96□□□□□ -0.65
USP35-207ENST00000530546 ARMC4Q5T2S8 1044 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 KCTD20Q7Z5Y7 419 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 LINC01555Q8NAE3 123 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 TP53I13Q8NBR0 393 aaPredicted RBP10.96□□□□□ -0.65
USP35-207ENST00000530546 CHST8Q9H2A9 424 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 NIPAL2Q9H841 368 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 REEP1Q9H902 201 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 B3GNT2Q9NY97 397 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 MSRAQ9UJ68 235 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 ZNF451Q9Y4E5 1061 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 COL4A3Q01955 1670 aa10.96□□□□□ -0.65
USP35-207ENST00000530546 PPM1DO15297 605 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 RNGTTO60942 597 aaKnown RBP10.96□□□□□ -0.66
USP35-207ENST00000530546 TBX6O95947 436 aaPredicted RBP10.96□□□□□ -0.66
USP35-207ENST00000530546 GADD45AP24522 165 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 RFX2P48378 723 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 RPS26P62854 115 aaKnown RBP10.96□□□□□ -0.66
USP35-207ENST00000530546 VEZF1Q14119 521 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 MLF2Q15773 248 aaPredicted RBP10.96□□□□□ -0.66
USP35-207ENST00000530546 TBCEQ15813 527 aaPredicted RBP10.96□□□□□ -0.66
USP35-207ENST00000530546 SLC5A12Q1EHB4 618 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 PROX2Q3B8N5 592 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 GCNT6Q5T4J0 391 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 KHDRBS2Q5VWX1 349 aaKnown RBP10.96□□□□□ -0.66
USP35-207ENST00000530546 SLC44A2Q8IWA5 706 aaPredicted RBP10.96□□□□□ -0.66
USP35-207ENST00000530546 OXR1Q8N573 874 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 CDCA3Q99618 268 aaPredicted RBP10.96□□□□□ -0.66
USP35-207ENST00000530546 TAAR2Q9P1P5 351 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 CORO2BQ9UQ03 480 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms