RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 COLGALT1Q8NBJ5 622 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 TMEM186Q96B77 213 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 PSMB7Q99436 277 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 COQ7Q99807 217 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 ADNPQ9H2P0 1102 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 Q9HAA7 133 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 HPS4Q9NQG7 708 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 TUBGCP4Q9UGJ1 667 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 CCPG1Q9ULG6 757 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 ENTPD4Q9Y227 616 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 SLC6A5Q9Y345 797 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 ATG4BQ9Y4P1 393 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 CPQQ9Y646 472 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 RPGRIP1LQ68CZ1 1315 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 IGHV3-16A0A0C4DH30 117 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 TEX48A0A1B0GUV7 120 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 ARHGAP42A6NI28 874 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 ACOD1A6NK06 481 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 SHISA9B4DS77 424 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 CRLF1O75462 422 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 CCDC159P0C7I6 412 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 CCDC192P0DO97 292 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 SFNP31947 248 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 GAMTQ14353 236 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 PDK1Q15118 436 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 CCL14Q16627 93 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 CCDC40Q4G0X9 1142 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 UNC50Q53HI1 259 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 WDR25Q64LD2 544 aaPredicted RBP4.77□□□□□ -1.65
CASP4-208ENST00000530309 TMUB2Q71RG4 321 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 TIPARPQ7Z3E1 657 aaKnown RBP4.77□□□□□ -1.65
CASP4-208ENST00000530309 TAF8Q7Z7C8 310 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 MYPOPQ86VE0 399 aaPredicted RBP4.77□□□□□ -1.65
CASP4-208ENST00000530309 CSNK1G2-AS1Q8NCQ2 148 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 CBWD1Q9BRT8 395 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 RBM24Q9BX46 236 aaKnown RBP4.77□□□□□ -1.65
CASP4-208ENST00000530309 FTHL17Q9BXU8 183 aa4.77□□□□□ -1.65
CASP4-208ENST00000530309 AFF2P51816 1311 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 A0A0U1RRA0 63 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 CFAP73A6NFT4 308 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 SEC22BO75396 215 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 SEMA4FO95754 770 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 HOXD4P09016 255 aaPredicted RBP4.76□□□□□ -1.65
CASP4-208ENST00000530309 CLPPQ16740 277 aaPredicted RBP4.76□□□□□ -1.65
CASP4-208ENST00000530309 SHROOM1Q2M3G4 852 aaPredicted RBP4.76□□□□□ -1.65
CASP4-208ENST00000530309 MFSD7Q6UXD7 560 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 WDR88Q6ZMY6 472 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 YRDCQ86U90 279 aaKnown RBP4.76□□□□□ -1.65
CASP4-208ENST00000530309 LRRC49Q8IUZ0 686 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 ZNF619Q8N2I2 560 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 TMEM37Q8WXS4 190 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 NSMCE2Q96MF7 247 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 ACCSQ96QU6 501 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 SIRPDQ9H106 197 aa4.76□□□□□ -1.65
CASP4-208ENST00000530309 FAM205AQ6ZU69 1335 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 PTPRUQ92729 1446 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 RNF103-CHMP3A0A140T963 221 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 TMEM89A2RUT3 159 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 GALR3O60755 368 aaPredicted RBP4.75□□□□□ -1.65
CASP4-208ENST00000530309 GNSP15586 552 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 CAPN2P17655 700 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 IL4RP24394 825 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 CALML3P27482 149 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 PGFP49763 221 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 GSTO1P78417 241 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 TMEM44Q2T9K0 475 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 HKDC1Q2TB90 917 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 OR6B2Q6IFH4 312 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 CWC27Q6UX04 472 aaKnown RBP4.75□□□□□ -1.65
CASP4-208ENST00000530309 SLC25A42Q86VD7 318 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 LRRC17Q8N6Y2 441 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 BEST4Q8NFU0 473 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 U2AF1L4Q8WU68 220 aaKnown RBP4.75□□□□□ -1.65
CASP4-208ENST00000530309 TMEM45BQ96B21 275 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.75□□□□□ -1.65
CASP4-208ENST00000530309 MRPL11Q9Y3B7 192 aaKnown RBP4.75□□□□□ -1.65
CASP4-208ENST00000530309 STYXL1Q9Y6J8 313 aa4.75□□□□□ -1.65
CASP4-208ENST00000530309 A0A0A6YYD4 124 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 A0A1B0GTH9 108 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 MT-ND1P03886 318 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 FCGR3AP08637 254 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 GATA1P15976 413 aaPredicted RBP4.74□□□□□ -1.65
CASP4-208ENST00000530309 TRIM23P36406 574 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 NPY2RP49146 381 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 NUMBP49757 651 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 PKN2Q16513 984 aaKnown RBP4.74□□□□□ -1.65
CASP4-208ENST00000530309 PCK2Q16822 640 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 ANKRD55Q3KP44 614 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 KRTAP27-1Q3LI81 207 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 VWA2Q5GFL6 755 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 REP15Q6BDI9 236 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 ARMCX5Q6P1M9 558 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 CNSTQ6PJW8 725 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 ADGRD2Q7Z7M1 963 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 HDDC3Q8N4P3 179 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 POM121L12Q8N7R1 296 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 OR4Q3Q8NH05 313 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 FAM222BQ8WU58 562 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 TOMM40LQ969M1 308 aa4.74□□□□□ -1.65
CASP4-208ENST00000530309 NTNG2Q96CW9 530 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms