RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 GALNT7Q86SF2 657 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 PPP1R14CQ8TAE6 165 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 FAM45AQ8TCE6 357 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 TMEM171Q8WVE6 324 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 ANKRD49Q8WVL7 239 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 WNT2BQ93097 391 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 ANKRD9Q96BM1 317 aaPredicted RBP9.51□□□□□ -0.89
COPB1-207ENST00000529866 INTS12Q96CB8 462 aaKnown RBP9.51□□□□□ -0.89
COPB1-207ENST00000529866 PDLIM5Q96HC4 596 aaKnown RBP9.51□□□□□ -0.89
COPB1-207ENST00000529866 GNRHR2Q96P88 292 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 TBCDQ9BTW9 1192 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 TRIM31Q9BZY9 425 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 EHD1Q9H4M9 534 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 SMYD2Q9NRG4 433 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 SNX15Q9NRS6 342 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 TEX10Q9NXF1 929 aaPredicted RBP9.51□□□□□ -0.89
COPB1-207ENST00000529866 KLHL28Q9NXS3 571 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 GPRC5BQ9NZH0 403 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 PYCARDQ9ULZ3 195 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 ROS1P08922 2347 aa9.51□□□□□ -0.89
COPB1-207ENST00000529866 MSTNO14793 375 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 OR10H2O60403 315 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 SEC31AO94979 1220 aaKnown RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 F12P00748 615 aaPredicted RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 ALOX15P16050 662 aaPredicted RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 TCP1P17987 556 aaKnown RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 HIST1H1TP22492 207 aaPredicted RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 CHMP24386 653 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ATP5A1P25705 553 aaKnown RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 TLX1P31314 330 aaPredicted RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 GMPRP36959 345 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 NRG3P56975 720 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 TAS2R39P59534 338 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 HERVK_113P63132 956 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ERVK-8P63133 956 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 DR1Q01658 176 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 MORF4L2Q15014 288 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 SPRED3Q2MJR0 410 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 PAGE2BQ5JRK9 111 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 WIPI1Q5MNZ9 446 aaPredicted RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 HLA-DQA1Q5Y7H0 255 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 PLEKHM3Q6ZWE6 761 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ADAMTSL2Q86TH1 951 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ZC3HC1Q86WB0 502 aaKnown RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 GRAMD2AQ8IUY3 354 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ST13P4Q8IZP2 240 aaPredicted RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 GCNT2Q8N0V5 402 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ACOT4Q8N9L9 421 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 BBOF1Q8ND07 529 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 SPPL2AQ8TCT8 520 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 SLC44A1Q8WWI5 657 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 TMEM41AQ96HV5 264 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 VPS39Q96JC1 886 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 FAM111AQ96PZ2 611 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 F2RL3Q96RI0 385 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 KRT12Q99456 494 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 MAPKAP1Q9BPZ7 522 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 TUBA1CQ9BQE3 449 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 NAT9Q9BTE0 207 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 MCMBPQ9BTE3 642 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ERVK-6Q9BXR3 956 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ANGPTL4Q9BY76 406 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 PPANQ9NQ55 473 aaKnown RBP9.5□□□□□ -0.89
COPB1-207ENST00000529866 PRDM7Q9NQW5 492 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 MS4A12Q9NXJ0 267 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 FETUBQ9UGM5 382 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 ERVK-19Q9WJR5 959 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 VWA7Q9Y334 891 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 OARD1Q9Y530 152 aa9.5□□□□□ -0.89
COPB1-207ENST00000529866 FAM95CA0A1B0GW59 222 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 E7ESA3 106 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 HRKO00198 91 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 CLGNO14967 610 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 SNPHO15079 494 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 SIAH2O43255 324 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 ZSCAN12O43309 604 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 SMNDC1O75940 238 aaKnown RBP eCLIP9.49□□□□□ -0.89
COPB1-207ENST00000529866 SCELO95171 688 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 WISP3O95389 354 aaPredicted RBP9.49□□□□□ -0.89
COPB1-207ENST00000529866 TBX6O95947 436 aaPredicted RBP9.49□□□□□ -0.89
COPB1-207ENST00000529866 CPN1P15169 458 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 PAX1P15863 534 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 KRT15P19012 456 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 CD79BP40259 229 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 GDF5P43026 501 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 SSR2P43308 183 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 SLCO1A2P46721 670 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 SLC6A12P48065 614 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 NAGLUP54802 743 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 ATP5J2P56134 94 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 FBXW4P57775 412 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 SRYQ05066 204 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 ZNF267Q14586 743 aaPredicted RBP9.49□□□□□ -0.89
COPB1-207ENST00000529866 SETDB1Q15047 1291 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 HIST2H2ACQ16777 129 aaPredicted RBP9.49□□□□□ -0.89
COPB1-207ENST00000529866 AP5B1Q2VPB7 878 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 KBTBD12Q3ZCT8 623 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 TMEM35AQ53FP2 167 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 BICRALQ6AI39 1079 aa9.49□□□□□ -0.89
COPB1-207ENST00000529866 TIGD3Q6B0B8 471 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms