RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PCDHGA4Q9Y5G9 962 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 PMF1-BGLAPU3KQ54 211 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 SEMA7AO75326 666 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 RPLP0P05388 317 aaKnown RBP14.5□□□□□ -0.09
USH1C-207ENST00000527720 OCM2P0CE71 109 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 OCMP0CE72 109 aaPredicted RBP14.5□□□□□ -0.09
USH1C-207ENST00000527720 CD72P21854 359 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 NDUFS1P28331 727 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 ITGADQ13349 1161 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 LRRC32Q14392 662 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 ATAT1Q5SQI0 421 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 ZNF425Q6IV72 752 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 DEF8Q6ZN54 512 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 USP43Q70EL4 1123 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 ZNF554Q86TJ5 538 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 OR8K5Q8NH50 307 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 RPL3LQ92901 407 aaKnown RBP14.5□□□□□ -0.09
USH1C-207ENST00000527720 Q96MT0 163 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 DCSTAMPQ9H295 470 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 PRDM8Q9NQV8 689 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 OR6C2Q9NZP2 312 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 TRPC4Q9UBN4 977 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 ENTPD4Q9Y227 616 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 SLC9A8Q9Y2E8 581 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 A3GALT2U3KPV4 340 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 A0A1W2PR48 441 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 A0A1W2PRQ8 180 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 OR10H3O60404 316 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 UGT2B17O75795 530 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 PEBP1P30086 187 aaKnown RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 SLC15A1P46059 708 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 SOX9P48436 509 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 LBX1P52954 281 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 KIAA1024LP59773 190 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 STXBP1P61764 594 aaKnown RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 ALDH6A1Q02252 535 aaKnown RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 TGM3Q08188 693 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 SEC23BQ15437 767 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 CEBPEQ15744 281 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TMEM201Q5SNT2 666 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 SLX4IPQ5VYV7 408 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 PPP2R2DQ66LE6 453 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 SZRD1Q7Z422 152 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 FBXL6Q8N531 539 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 OR5D16Q8NGK9 328 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 SUN3Q8TAQ9 357 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 OR2M4Q96R27 311 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 FZD3Q9NPG1 666 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 RHBDL2Q9NX52 303 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 A4GNTQ9UNA3 340 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 KLK4Q9Y5K2 254 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3DA0A087WVF3 549 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3IA0A087WXS9 549 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3EA0A087X179 549 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3KA0A087X1G2 549 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 A0A0G2JPF8 293 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 PRSS38A1L453 326 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3FA6NER0 549 aaPredicted RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 HNRNPCL2B2RXH8 293 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 HNRNPCL3B7ZW38 293 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3LB9A6J9 549 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 C4orf51C9J302 202 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TLR4O00206 839 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 KPNA4O00629 521 aaPredicted RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 TOR1BO14657 336 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 CASC3O15234 703 aaKnown RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 FHP07954 510 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3HP0C7X1 549 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 HNRNPCL4P0DMR1 293 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 COX10Q12887 443 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 NDUFA9Q16795 377 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TMEM196Q5HYL7 178 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TMEM236Q5W0B7 351 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3GQ6DHY5 549 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3CQ6IPX1 549 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 SLC48A1Q6P1K1 146 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 CD300LDQ6UXZ3 194 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 WASH2PQ6VEQ5 465 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TBC1D3Q8IZP1 549 aaPredicted RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 MFSD4AQ8N468 514 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 TMEM145Q8NBT3 493 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 OR4D11Q8NGI4 311 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 VANGL1Q8TAA9 524 aaPredicted RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 MMP27Q9H306 513 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 SLC25A19Q9HC21 320 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 GIMAP4Q9NUV9 329 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 LYARQ9NX58 379 aaKnown RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 CES1P1Q9UKY3 287 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 ATG4BQ9Y4P1 393 aa14.49□□□□□ -0.09
USH1C-207ENST00000527720 GOLGA4Q13439 2230 aaKnown RBP14.49□□□□□ -0.09
USH1C-207ENST00000527720 ERAL1O75616 437 aaKnown RBP14.48□□□□□ -0.09
USH1C-207ENST00000527720 AIFM1O95831 613 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 PTHP01270 115 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 CSNK2A2P19784 350 aaPredicted RBP14.48□□□□□ -0.09
USH1C-207ENST00000527720 PBX2P40425 430 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 PRR5P85299 388 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 MEDAGQ5VYS4 303 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 C12orf73Q69YU5 71 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 PLAG1Q6DJT9 500 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 PGBD2Q6P3X8 592 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms