RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 A0A1W2PQ72 361 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 A0A1W2PR48 441 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 PIP5K1BO14986 540 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 TOXO94900 526 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 SEMA3DO95025 777 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 BMP10O95393 424 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 HSPA4LO95757 839 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 WDPCPO95876 746 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 GBAP04062 536 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 SERPINA7P05543 415 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 ABOP16442 354 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 HIST1H1TP22492 207 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 HMOX2P30519 316 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 ARL1P40616 181 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 MTTPP55157 894 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 LIM2P55344 173 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 BTKQ06187 659 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 CSTF3Q12996 717 aaKnown RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 IFT88Q13099 833 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 PRSS53Q2L4Q9 553 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 RFTN2Q52LD8 501 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 GALNT18Q6P9A2 607 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 ABHD13Q7L211 337 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 ZCCHC7Q8N3Z6 543 aaKnown RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 GBP7Q8N8V2 638 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 STT3BQ8TCJ2 826 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 TWIST2Q8WVJ9 160 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 RGMAQ96B86 450 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 FCRL1Q96LA6 429 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 MAGEB18Q96M61 343 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 SERINC2Q96SA4 455 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 CSF3RQ99062 836 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 MAPKAP1Q9BPZ7 522 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 POLDIP3Q9BY77 421 aaKnown RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 CLK4Q9HAZ1 481 aaKnown RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 EML4Q9HC35 981 aaKnown RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 ANKHQ9HCJ1 492 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 HCN3Q9P1Z3 774 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 VPS29Q9UBQ0 182 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 DAPP1Q9UN19 280 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 CDC14AQ9UNH5 594 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 SLC12A4Q9UP95 1085 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 EXO1Q9UQ84 846 aaKnown RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 PLEKHA6Q9Y2H5 1048 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 FIS1Q9Y3D6 152 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 ZNF407Q9C0G0 2248 aa10.17□□□□□ -0.78
NEDD8-204ENST00000526430 NSG1A0A0A6YYJ2 146 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 ASPDHA6ND91 283 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 URADA6NGE7 173 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 PRRG2O14669 202 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 LSM1O15116 133 aaKnown RBP10.16□□□□□ -0.78
NEDD8-204ENST00000526430 KLK1P06870 262 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 ZGLP1P0C6A0 271 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 CHRNB4P30926 498 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 HOXC12P31275 282 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 AVPR1BP47901 424 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 DGKQP52824 942 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 BTG2P78543 158 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 RHAGQ02094 409 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 GUCY1A3Q02108 690 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 KLC1Q07866 573 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 SLAMF1Q13291 335 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 TRIM40Q6P9F5 258 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 NDUFAF7Q7L592 441 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 SIAH3Q8IW03 269 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 WDR75Q8IWA0 830 aaKnown RBP10.16□□□□□ -0.78
NEDD8-204ENST00000526430 CHERPQ8IWX8 916 aaKnown RBP10.16□□□□□ -0.78
NEDD8-204ENST00000526430 GHDCQ8N2G8 530 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 C1orf52Q8N6N3 182 aaKnown RBP10.16□□□□□ -0.78
NEDD8-204ENST00000526430 SIRT6Q8N6T7 355 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 PLPP5Q8NEB5 264 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 TM4SF18Q96CE8 201 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 PEX11GQ96HA9 241 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 C7orf26Q96N11 449 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 KCNC2Q96PR1 638 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 NPLQ9BXD5 320 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-204ENST00000526430 SOX17Q9H6I2 414 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-204ENST00000526430 KCNJ16Q9NPI9 418 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 TRPC4Q9UBN4 977 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 ADAM29Q9UKF5 820 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 ATG4BQ9Y4P1 393 aa10.16□□□□□ -0.78
NEDD8-204ENST00000526430 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 ATP6AP2A0A1C7CYW4 349 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 NKX2-6A6NCS4 301 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 SLC28A1O00337 649 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 SDHDO14521 159 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 PRKRAO75569 313 aaKnown RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 ATP6AP2O75787 350 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 SNUPNO95149 360 aaKnown RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 F10P00742 488 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 COX6A1P12074 109 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 FBLP22087 321 aaKnown RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 TACR1P25103 407 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 SOX18P35713 384 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 XCR1P46094 333 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 HK2P52789 917 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 GYS2P54840 703 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 AP2B1P63010 937 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 ALDH6A1Q02252 535 aaKnown RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 AP5B1Q2VPB7 878 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms