RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 HCN2Q9UL51 889 aa12.48□□□□□ -0.41
TRIM3-203ENST00000525074 ALPK3Q96L96 1907 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 TRBV5-4A0A0C4DH59 114 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 ARHGEF33A8MVX0 844 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 C5orf58C9J3I9 102 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 SLC30A4O14863 429 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 PRMT3O60678 531 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 TSPAN9O75954 239 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 SLC16A8O95907 504 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 CELP19835 753 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 PPIBP23284 216 aaKnown RBP12.47□□□□□ -0.41
TRIM3-203ENST00000525074 RPA4Q13156 261 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 GINS1Q14691 196 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 SYT14P1Q58G82 188 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 MTFR2Q6P444 385 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 TRIM40Q6P9F5 258 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 CLDN22Q8N7P3 220 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 BMPERQ8N8U9 685 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 ZNF680Q8NEM1 530 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 SLC7A13Q8TCU3 470 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 CASD1Q96PB1 797 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 GTPBP2Q9BX10 602 aaKnown RBP12.47□□□□□ -0.41
TRIM3-203ENST00000525074 MCOLN1Q9GZU1 580 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 PPP1R3EQ9H7J1 279 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 ZDHHC3Q9NYG2 299 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 IL20RAQ9UHF4 553 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 M0R3H8 397 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 KLK1P06870 262 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 NR2F6P10588 404 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 DDCP20711 480 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 LHCGRP22888 699 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 PTX3P26022 381 aaPredicted RBP12.47□□□□□ -0.41
TRIM3-203ENST00000525074 ELAVL4P26378 380 aaKnown RBP12.47□□□□□ -0.41
TRIM3-203ENST00000525074 TIA1P31483 386 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRIM3-203ENST00000525074 CLDN20P56880 219 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 MLLT1Q03111 559 aaPredicted RBP12.47□□□□□ -0.41
TRIM3-203ENST00000525074 TCTN3Q6NUS6 607 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 AGTRAPQ6RW13 159 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 COMMD6Q7Z4G1 85 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 MARCH9Q86YJ5 346 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 ZNF366Q8N895 744 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 OR8J1Q8NGP2 316 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 MED28Q9H204 178 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 NUDT15Q9NV35 164 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 SH2B3Q9UQQ2 575 aa12.47□□□□□ -0.41
TRIM3-203ENST00000525074 TEX46H3BTG2 121 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 NME6O75414 186 aaPredicted RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 PIPP12273 146 aaPredicted RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 HMGA1P17096 107 aaKnown RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 POLR2CP19387 275 aaPredicted RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 CXCL3P19876 107 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 ALDH9A1P49189 494 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 CCT3P49368 545 aaKnown RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 AP2S1P53680 142 aaPredicted RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 PER3P56645 1201 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 ZNF791Q3KP31 576 aaPredicted RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 CCSAPQ6IQ19 270 aaPredicted RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 HSDL2Q6YN16 418 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 GPR32P1Q8NGA4 272 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 NEIL2Q969S2 332 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 TMEM43Q9BTV4 400 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 ABCG4Q9H172 646 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 EGLN3Q9H6Z9 239 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 RC3H2Q9HBD1 1191 aaKnown RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 PAK6Q9NQU5 681 aaPredicted RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 KNL1Q8NG31 2342 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 PCP4L1A6NKN8 68 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 NUPL2O15504 423 aaKnown RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 PQBP1O60828 265 aaKnown RBP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 RAB36O95755 333 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 ALDH1A1P00352 501 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 C8GP07360 202 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 GSTM1P09488 218 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 ASMTP46597 345 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 TEKQ02763 1124 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 GPNMBQ14956 572 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 CDKN3Q16667 212 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 KLHL22Q53GT1 634 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 CRB2Q5IJ48 1285 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 IDNKQ5T6J7 187 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 ZNF740Q8NDX6 193 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 CEP76Q8TAP6 659 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 NEIL3Q8TAT5 605 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRIM3-203ENST00000525074 GPA33Q99795 319 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 C17orf62Q9BQA9 187 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 VN1R3Q9BXE9 311 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 REEP4Q9H6H4 257 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 STARD7Q9NQZ5 370 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 EXTL2Q9UBQ6 330 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 ANGPT4Q9Y264 503 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 SLC9A8Q9Y2E8 581 aa12.46□□□□□ -0.41
TRIM3-203ENST00000525074 A0A1W2PRB8 838 aa12.46□□□□□ -0.42
TRIM3-203ENST00000525074 SYN3O14994 580 aa12.46□□□□□ -0.42
TRIM3-203ENST00000525074 EOMESO95936 686 aa12.46□□□□□ -0.42
TRIM3-203ENST00000525074 HRGP04196 525 aa12.46□□□□□ -0.42
TRIM3-203ENST00000525074 FAM157BP0CG42 384 aa12.46□□□□□ -0.42
TRIM3-203ENST00000525074 CD70P32970 193 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms