RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 GAL3ST4Q96RP7 486 aa19.12■□□□□ 0.65
TRIM35-203ENST00000521253 SSU72Q9NP77 194 aaKnown RBP19.12■□□□□ 0.65
TRIM35-203ENST00000521253 UTS2RQ9UKP6 389 aa19.12■□□□□ 0.65
TRIM35-203ENST00000521253 TMEM233B4DJY2 109 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 ERLIN1O75477 346 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 WISP2O76076 250 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 ATP1B1P05026 303 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 DRD2P14416 443 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 ARRB2P32121 409 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 PTGER1P34995 402 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 EBPQ15125 230 aaKnown RBP19.11■□□□□ 0.65
TRIM35-203ENST00000521253 PIGGQ5H8A4 983 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 SLC29A4Q7RTT9 530 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 CROCCP2Q86T23 111 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 CPSF7Q8N684 471 aaKnown RBP19.11■□□□□ 0.65
TRIM35-203ENST00000521253 FAM98AQ8NCA5 519 aaKnown RBP19.11■□□□□ 0.65
TRIM35-203ENST00000521253 OR6Y1Q8NGX8 325 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 PGM2Q96G03 612 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 PKNOX2Q96KN3 472 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 WWTR1Q9GZV5 400 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 TUBB1Q9H4B7 451 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 EML4Q9HC35 981 aaKnown RBP19.11■□□□□ 0.65
TRIM35-203ENST00000521253 TIMMDC1Q9NPL8 285 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 KLF13Q9Y2Y9 288 aaPredicted RBP19.11■□□□□ 0.65
TRIM35-203ENST00000521253 POLR3HQ9Y535 204 aaPredicted RBP19.11■□□□□ 0.65
TRIM35-203ENST00000521253 DNAJC15Q9Y5T4 150 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 ZNF780BQ9Y6R6 833 aa19.11■□□□□ 0.65
TRIM35-203ENST00000521253 HIVEP3Q5T1R4 2406 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 OR6C76A6NM76 312 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 NPIPB8E9PQR5 432 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 SLC28A1O00337 649 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 SEMA7AO75326 666 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 NADKO95544 446 aaPredicted RBP19.1■□□□□ 0.65
TRIM35-203ENST00000521253 FGF4P08620 206 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 PRPH2P23942 346 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 SERPINB5P36952 375 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 GSTM5P46439 218 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 SERPINB4P48594 390 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 ZNF763Q0D2J5 394 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 MGAT2Q10469 447 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 HEPACAMQ14CZ8 416 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 PRICKLE4Q2TBC4 344 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 BEND6Q5SZJ8 279 aaPredicted RBP19.1■□□□□ 0.65
TRIM35-203ENST00000521253 C6orf163Q5TEZ5 329 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 OPN5Q6U736 354 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 RNF165Q6ZSG1 346 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 Q6ZSR9 355 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 SULF2Q8IWU5 870 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 ZNF615Q8N8J6 731 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 PSD4Q8NDX1 1056 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 OR2T11Q8NH01 316 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 CDC26Q8NHZ8 85 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 FAM76AQ8TAV0 307 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 TRAF6Q9Y4K3 522 aa19.1■□□□□ 0.65
TRIM35-203ENST00000521253 SETXQ7Z333 2677 aaKnown RBP19.1■□□□□ 0.65
TRIM35-203ENST00000521253 PTPN13Q12923 2485 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 RGS14O43566 566 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 PEX1O43933 1283 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 SEC22BO75396 215 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 AGFG2O95081 481 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 CHEK2O96017 543 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 LINC00032P0C843 101 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 S1PR1P21453 382 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 MEOX1P50221 254 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 KCNK10P57789 538 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 GPR85P60893 370 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 ALDH6A1Q02252 535 aaKnown RBP19.09■□□□□ 0.65
TRIM35-203ENST00000521253 KIAA0040Q15053 153 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 UGT3A2Q3SY77 523 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 RNFT1Q5M7Z0 435 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 SH2D4BQ5SQS7 431 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 NOXRED1Q6NXP6 359 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 FAM111BQ6SJ93 734 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 NUDCD3Q8IVD9 361 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 CLYBLQ8N0X4 340 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 LRRC25Q8N386 305 aaPredicted RBP19.09■□□□□ 0.65
TRIM35-203ENST00000521253 VWA5B2Q8N398 1253 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 ADCY4Q8NFM4 1077 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 OR7G1Q8NGA0 311 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.09■□□□□ 0.65
TRIM35-203ENST00000521253 SLC22A8Q8TCC7 542 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 AGR3Q8TD06 166 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 TWIST2Q8WVJ9 160 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 EXOSC8Q96B26 276 aaKnown RBP19.09■□□□□ 0.65
TRIM35-203ENST00000521253 METTL2AQ96IZ6 378 aaKnown RBP19.09■□□□□ 0.65
TRIM35-203ENST00000521253 BRINP2Q9C0B6 783 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 TSPAN10Q9H1Z9 355 aaPredicted RBP19.09■□□□□ 0.65
TRIM35-203ENST00000521253 OR10A5Q9H207 317 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 C1orf109Q9NX04 203 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 MAT2BQ9NZL9 334 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 SEC14L3Q9UDX4 400 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 OSGIN2Q9Y236 505 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 ACTL7BQ9Y614 415 aa19.09■□□□□ 0.65
TRIM35-203ENST00000521253 C2orf92A0A1B0GVN3 265 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 WDR91A4D1P6 747 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 KLRC4-KLRK1H3BQV0 150 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 UNC5CO95185 931 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 NEFHP12036 1026 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 DDCP20711 480 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 SOX18P35713 384 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms