RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 TP53INP1Q96A56 240 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 PPWD1Q96BP3 646 aaKnown RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 RHBDF1Q96CC6 855 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 WDR34Q96EX3 536 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 TMEM41AQ96HV5 264 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 VPS39Q96JC1 886 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 GNRHR2Q96P88 292 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 UCN2Q96RP3 112 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 KRT12Q99456 494 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 ERVK-6Q9BXR3 956 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 PHACTR1Q9C0D0 580 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 RPF2Q9H7B2 306 aaKnown RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 DNAJC11Q9NVH1 559 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 TEX10Q9NXF1 929 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 C6orf203Q9P0P8 240 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 ERVK-19Q9WJR5 959 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 NPFFR2Q9Y5X5 522 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 CUBNO60494 3623 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 SONP18583 2426 aaKnown RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 C2orf92A0A1B0GVN3 265 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 DEFB108AA8MXU0 73 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 H0Y3Z8 333 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 MSTNO14793 375 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 OR10H2O60403 315 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 TMCC2O75069 709 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 IFNA2P01563 188 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 PAX1P15863 534 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 CRYGSP22914 178 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 SERPINB1P30740 379 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 GALNSP34059 522 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 SLCO1A2P46721 670 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 PTH2RP49190 550 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 NAGLUP54802 743 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 FBXW4P57775 412 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 PCDH1Q08174 1060 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 EIPR1Q53HC9 387 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 WIPI1Q5MNZ9 446 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 FNDC7Q5VTL7 733 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 HLA-DQA1Q5Y7H0 255 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 TIGD3Q6B0B8 471 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 ADNP2Q6IQ32 1131 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 ENPP6Q6UWR7 440 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 ADGRE4PQ86SQ3 457 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 MED12LQ86YW9 2145 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 OR4N5Q8IXE1 308 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 FAM83FQ8NEG4 500 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 OR1J4Q8NGS1 313 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 PPP1R14CQ8TAE6 165 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 RIT1Q92963 219 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 UBE2E3Q969T4 207 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 INTS12Q96CB8 462 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 PIK3IP1Q96FE7 263 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 TUBA1CQ9BQE3 449 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 MED18Q9BUE0 208 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 MS4A8Q9BY19 250 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 CTNNAL1Q9UBT7 734 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 PHF11Q9UIL8 331 aa10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 ZNF490Q9ULM2 529 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-203ENST00000517667 NCF1BA6NI72 391 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 NCF1CA8MVU1 366 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 RTCAO00442 366 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 NCF1P14598 390 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 PTPN6P29350 595 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 GGT5P36269 586 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 BUD31P41223 144 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 CASP3P42574 277 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 TNFRSF17Q02223 184 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 DMTNQ08495 405 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 DOC2AQ14183 400 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 ZNF267Q14586 743 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 TGFBIQ15582 683 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 TSNQ15631 228 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 PDK4Q16654 411 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 C18orf21Q32NC0 220 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 TEDDM1Q5T9Z0 273 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 BICRALQ6AI39 1079 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 HMBOX1Q6NT76 420 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 TTC27Q6P3X3 843 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 DGAT2L6Q6ZPD8 337 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 UBE3DQ7Z6J8 389 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 PHC2Q8IXK0 858 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 GCNT2Q8N0V5 402 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 MEIOBQ8N635 442 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 SLC44A1Q8WWI5 657 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 TMEM158Q8WZ71 300 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 MAGOHBQ96A72 148 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 WFIKKN1Q96NZ8 548 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 CENPKQ9BS16 269 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 PRM3Q9NNZ6 103 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 WWOXQ9NZC7 414 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 SLC17A6Q9P2U8 582 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 CLCF1Q9UBD9 225 aa10.43□□□□□ -0.74
TRAPPC9-203ENST00000517667 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.42□□□□□ -0.74
TRAPPC9-203ENST00000517667 SIAH2O43255 324 aa10.42□□□□□ -0.74
TRAPPC9-203ENST00000517667 STK16O75716 305 aa10.42□□□□□ -0.74
TRAPPC9-203ENST00000517667 TNFSF13O75888 250 aa10.42□□□□□ -0.74
TRAPPC9-203ENST00000517667 CRHP06850 196 aa10.42□□□□□ -0.74
TRAPPC9-203ENST00000517667 RHOXF2BP0C7M4 288 aa10.42□□□□□ -0.74
TRAPPC9-203ENST00000517667 KRT15P19012 456 aa10.42□□□□□ -0.74
TRAPPC9-203ENST00000517667 SOX18P35713 384 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms