RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 N4BP2L2Q92802 583 aaPredicted RBP-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 TNFRSF14Q92956 283 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 C5orf30Q96GV9 206 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 MASTLQ96GX5 879 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 FAM81BQ96LP2 452 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 COQ7Q99807 217 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 PRRT1Q99946 306 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 TIMM29Q9BSF4 260 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 RTKNQ9BST9 563 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 TMEM121Q9BTD3 319 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 PARP12Q9H0J9 701 aaKnown RBP-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 ALX4Q9H161 411 aaPredicted RBP-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 CYSTM1Q9H1C7 97 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 ITM2CQ9NQX7 267 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 SH3GLB2Q9NR46 395 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 IL1RAPL1Q9NZN1 696 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 TSPYL4Q9UJ04 414 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 WDR45Q9Y484 360 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 CLIC4Q9Y696 253 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 ABCA12Q86UK0 2595 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 ANK2Q01484 3957 aa-1.8□□□□□ -2.7
SNORA40.16-201ENST00000517238 MN1Q10571 1320 aaPredicted RBP-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 ZBED9Q6R2W3 1325 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 CACNA1BQ00975 2339 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 GRIFINA4D1Z8 144 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 LIPT2A6NK58 231 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 RNF212BA8MTL3 300 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 H7C0S8 307 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 O00370 1275 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 AP3D1O14617 1153 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 KIF5CO60282 957 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 SDC3O75056 442 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 SAP30O75446 220 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 RAB36O95755 333 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 SLC16A8O95907 504 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 CSF2P04141 144 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 FCGR3AP08637 254 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 GZMAP12544 262 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 TCF4P15884 667 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 PRDX3P30048 256 aaKnown RBP-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 PRCPP42785 496 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 SLC10A7Q0GE19 358 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 LMOD3Q0VAK6 560 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 EFR3AQ14156 821 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 GALEQ14376 348 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 POLD3Q15054 466 aaPredicted RBP-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 NSDHLQ15738 373 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 HAGHQ16775 308 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 SPANXN4Q5MJ08 99 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 TXNDC8Q6A555 127 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 ITPRIPL1Q6GPH6 555 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 CTRB2Q6GPI1 263 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 RINLQ6ZS11 566 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 TPRG1Q6ZUI0 275 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 FRA10AC1Q70Z53 315 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 NLRP14Q86W24 1093 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 CEP97Q8IW35 865 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 DND1Q8IYX4 353 aaKnown RBP-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 ARHGAP24Q8N264 748 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 C15orf53Q8NAA6 179 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 OR2AP1Q8NGE2 309 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 OR10S1Q8NGN2 331 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 OR5W2Q8NH69 310 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 ATL2Q8NHH9 583 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 MUC7Q8TAX7 377 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 CD99L2Q8TCZ2 262 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 SCFD2Q8WU76 684 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 LRTOMTQ8WZ04 291 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 EXOSC8Q96B26 276 aaKnown RBP-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 CMTM5Q96DZ9 223 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 BMFQ96LC9 184 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 TAAR1Q96RJ0 339 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 CCDC3Q9BQI4 270 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 TTYH2Q9BSA4 534 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 DPH7Q9BTV6 452 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 ZNF416Q9BWM5 594 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 AGXT2Q9BYV1 514 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 TBC1D13Q9NVG8 400 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 FANCLQ9NW38 375 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 SLC5A4Q9NY91 659 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 NDUFAF4Q9P032 175 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 RPH3AQ9Y2J0 694 aaPredicted RBP-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 PTPN13Q12923 2485 aa-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 SONP18583 2426 aaKnown RBP-1.81□□□□□ -2.7
SNORA40.16-201ENST00000517238 CRB1P82279 1406 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 NPHP3Q7Z494 1330 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 IGLV11-55A0A075B6I3 123 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 IGKV3D-7A0A0C4DH55 119 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 IGKV3OR2-268A0A0C4DH90 116 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 POM121BA6NF01 834 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 OR6C70A6NIJ9 312 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 NKX6-3A6NJ46 265 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 TCP10L2B9ZVM9 353 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 G3V3Y1 287 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 SS18L1O75177 396 aaPredicted RBP-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 CTSGP08311 255 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 PTPN4P29074 926 aa-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 GTF2F1P35269 517 aaKnown RBP eCLIP-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 GARSP41250 739 aaKnown RBP-1.82□□□□□ -2.7
SNORA40.16-201ENST00000517238 STARP49675 285 aa-1.82□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms