RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PRTFDC1Q9NRG1 225 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 TRRAPQ9Y4A5 3859 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 CXorf49A8MYA2 514 aaPredicted RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 MSTNO14793 375 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 OR1F1O43749 312 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 PIAS1O75925 651 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 HPNP05981 417 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 ZNF16P17020 682 aaPredicted RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 IGFBP5P24593 272 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 PPARGP37231 505 aaPredicted RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 TTPAP49638 278 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 NAGLUP54802 743 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 DIO3P55073 304 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 CASP9P55211 416 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 PRAMEP78395 509 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 PWP1Q13610 501 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 CASP8Q14790 479 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 SF3B4Q15427 424 aaKnown RBP eCLIP8.28□□□□□ -1.082e-6■■□□□ 13.6
NUP54-211ENST00000512151 ELAVL1Q15717 326 aaKnown RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 UAP1Q16222 522 aaPredicted RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 AARS2Q5JTZ9 985 aaKnown RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 ARMC3Q5W041 872 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 VWA1Q6PCB0 445 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 MBOAT1Q6ZNC8 495 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 C3orf62Q6ZUJ4 267 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 C17orf64Q86WR6 236 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 LRRC6Q86X45 466 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 PALM2Q8IXS6 379 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 PEX13Q92968 403 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 ABTB1Q969K4 478 aaPredicted RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 SPACA9Q96E40 222 aaPredicted RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 ZFP3Q96NJ6 502 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 FAM111AQ96PZ2 611 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 NAT9Q9BTE0 207 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 OPN3Q9H1Y3 402 aaPredicted RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 ACBD3Q9H3P7 528 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 MOCS1Q9NZB8 636 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 SLC17A6Q9P2U8 582 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 CLCF1Q9UBD9 225 aa8.28□□□□□ -1.08
NUP54-211ENST00000512151 GDF2Q9UK05 429 aaPredicted RBP8.28□□□□□ -1.08
NUP54-211ENST00000512151 TCRBV9S1A1TA0A576 114 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 SLC35F4A4IF30 521 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 NDUFS3O75489 264 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
NUP54-211ENST00000512151 ETHE1O95571 254 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 TTC4O95801 387 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 IFNA16P05015 189 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 CYP4B1P13584 511 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 CHRM3P20309 590 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 PCYT1AP49585 367 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 MTTPP55157 894 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 VLDLRP98155 873 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 DEFA6Q01524 100 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 CTBP1Q13363 440 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 RCAN2Q14206 197 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 FRG1Q14331 258 aaKnown RBP8.27□□□□□ -1.09
NUP54-211ENST00000512151 MPEG1Q2M385 716 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 HSP90AA5PQ58FG0 334 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 TEDDM1Q5T9Z0 273 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 CYHR1Q6ZMK1 362 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 DENND6AQ8IWF6 608 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 TMEM132CQ8N3T6 1108 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 FAM47BQ8NA70 645 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 MORN4Q8NDC4 146 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 OR8K3Q8NH51 312 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 LILRB1Q8NHL6 650 aaPredicted RBP8.27□□□□□ -1.09
NUP54-211ENST00000512151 UHMK1Q8TAS1 419 aaKnown RBP8.27□□□□□ -1.09
NUP54-211ENST00000512151 SLC2A12Q8TD20 617 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 FBF1Q8TES7 1133 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.27□□□□□ -1.09
NUP54-211ENST00000512151 LPGAT1Q92604 370 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 AKAP1Q92667 903 aaKnown RBP eCLIP8.27□□□□□ -1.09
NUP54-211ENST00000512151 WNT2BQ93097 391 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 CERS2Q96G23 380 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 PKNOX2Q96KN3 472 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 QRFPRQ96P65 431 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 GNRHR2Q96P88 292 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 TM9SF2Q99805 663 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 TMEM204Q9BSN7 226 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 DOHHQ9BU89 302 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 CLK4Q9HAZ1 481 aaKnown RBP8.27□□□□□ -1.09
NUP54-211ENST00000512151 IARS2Q9NSE4 1012 aaKnown RBP8.27□□□□□ -1.09
NUP54-211ENST00000512151 C20orf96Q9NUD7 363 aaPredicted RBP8.27□□□□□ -1.09
NUP54-211ENST00000512151 CLCA3PQ9Y6N3 262 aa8.27□□□□□ -1.09
NUP54-211ENST00000512151 A0A0G2JN53 185 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 FRG2CA6NGY1 282 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 FAM159BA6NKW6 160 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 RIPK2O43353 540 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 LMX1BO60663 402 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 TGM6O95932 706 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 GSTA2P09210 222 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 DANCRP0C864 163 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 IGHV4-31P0DP07 118 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 NPPBP16860 134 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 ITGA2P17301 1181 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 GABRB3P28472 473 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 CLCN7P51798 805 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 HSD17B7P56937 341 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 SKP1P63208 163 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 SRYQ05066 204 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms