RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 CD46P15529 392 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 MPIP34949 423 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 RPL3P39023 403 aaKnown RBP16.02■□□□□ 0.16
CLDND1-221ENST00000510541 FRKP42685 505 aaPredicted RBP16.02■□□□□ 0.16
CLDND1-221ENST00000510541 SSR4P51571 173 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 PDE7AQ13946 482 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 NR6A1Q15406 480 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 RFTN2Q52LD8 501 aaPredicted RBP16.02■□□□□ 0.16
CLDND1-221ENST00000510541 C6orf163Q5TEZ5 329 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 CES4AQ5XG92 561 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 ATG16L1Q676U5 607 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 OPN5Q6U736 354 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 PRICKLE2Q7Z3G6 844 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 FAM9CQ8IZT9 166 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 POGLUT1Q8NBL1 392 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 SNRNP40Q96DI7 357 aaKnown RBP16.02■□□□□ 0.16
CLDND1-221ENST00000510541 C20orf27Q9GZN8 174 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 AGPAT4Q9NRZ5 378 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 GIMAP4Q9NUV9 329 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 CSAG2Q9Y5P2 127 aa16.02■□□□□ 0.16
CLDND1-221ENST00000510541 POLEQ07864 2286 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 WASHC1A8K0Z3 465 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 CRYABP02511 175 aaKnown RBP16.01■□□□□ 0.15
CLDND1-221ENST00000510541 CLPSP04118 112 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 UQCRHP07919 91 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 LINC00032P0C843 101 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 PRPS2P11908 318 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 NAGAP17050 411 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 DCAF7P61962 342 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 ID2Q02363 134 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 EBPQ15125 230 aaKnown RBP16.01■□□□□ 0.15
CLDND1-221ENST00000510541 OR1C1Q15619 314 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 ATP6AP1LQ52LC2 224 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 C6orf136Q5SQH8 315 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 SCIMPQ6UWF3 145 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 RNF111Q6ZNA4 994 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 DGAT2L6Q6ZPD8 337 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 SLC29A4Q7RTT9 530 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 R3HCC1LQ7Z5L2 792 aaKnown RBP16.01■□□□□ 0.15
CLDND1-221ENST00000510541 ZNF227Q86WZ6 799 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 C9orf40Q8IXQ3 194 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 VWA5B2Q8N398 1253 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 CATSPER1Q8NEC5 780 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 KLHL29Q96CT2 875 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 C19orf60Q96EN9 201 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 RASL10BQ96S79 203 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 MAT2BQ9NZL9 334 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 LRFN1Q9P244 771 aa16.01■□□□□ 0.15
CLDND1-221ENST00000510541 EXO1Q9UQ84 846 aaKnown RBP16.01■□□□□ 0.15
CLDND1-221ENST00000510541 COPG1Q9Y678 874 aaKnown RBP16.01■□□□□ 0.15
CLDND1-221ENST00000510541 SPENQ96T58 3664 aaKnown RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 GCN1Q92616 2671 aaKnown RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 ITM2AO43736 263 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 PRKNO60260 465 aaPredicted RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 SP1P08047 785 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 SDC1P18827 310 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 SOX18P35713 384 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 ERVK-8P63133 956 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 EMX2Q04743 252 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 BST1Q10588 318 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 ZNF267Q14586 743 aaPredicted RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 MLC1Q15049 377 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 ZNF766Q5HY98 468 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 SLC25A25Q6KCM7 469 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 OGFOD2Q6N063 350 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 TMEM81Q6P7N7 255 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 BNC2Q6ZN30 1099 aaPredicted RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 BCORP1Q8N888 145 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 SLC22A8Q8TCC7 542 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 FAR1Q8WVX9 515 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 UCN3Q969E3 161 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 ADIPOR1Q96A54 375 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 TMEM125Q96AQ2 219 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 PPWD1Q96BP3 646 aaKnown RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 SECISBP2Q96T21 854 aaKnown RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 SLX1AQ9BQ83 275 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 MFRPQ9BY79 579 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 WWTR1Q9GZV5 400 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16■□□□□ 0.15
CLDND1-221ENST00000510541 OR10A5Q9H207 317 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 ACSS1Q9NUB1 689 aaPredicted RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 PLA2G3Q9NZ20 509 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 NTMQ9P121 344 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 PRODH2Q9UF12 536 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 ERVK-19Q9WJR5 959 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 KLF13Q9Y2Y9 288 aaPredicted RBP16■□□□□ 0.15
CLDND1-221ENST00000510541 CROCCQ5TZA2 2017 aa16■□□□□ 0.15
CLDND1-221ENST00000510541 TTC36A6NLP5 189 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 TMEM233B4DJY2 109 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 ACOX3O15254 700 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 NME2P1O60361 137 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 MAN1A2O60476 641 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 WISP1O95388 367 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 BCKDHAP12694 445 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 BGNP21810 368 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 NME2P22392 152 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 OCRLQ01968 901 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 BTKQ06187 659 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 C2orf80Q0P641 193 aa15.99■□□□□ 0.15
CLDND1-221ENST00000510541 ZNF628Q5EBL2 1059 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms