RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SPANXN3Q5MJ09 141 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 TEDDM1Q5T9Z0 273 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 ADNP2Q6IQ32 1131 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 TTC27Q6P3X3 843 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 PODNL1Q6PEZ8 512 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 SCIMPQ6UWF3 145 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 RNF111Q6ZNA4 994 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 DGAT2L6Q6ZPD8 337 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 UBE3DQ7Z6J8 389 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 ADAMTSL2Q86TH1 951 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 PACS2Q86VP3 889 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 ST13P4Q8IZP2 240 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-211ENST00000508546 TAGAPQ8N103 731 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 NKAPQ8N5F7 415 aaKnown RBP8.56□□□□□ -1.04
NEDD9-211ENST00000508546 SPPL2AQ8TCT8 520 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 PTCD3Q96EY7 689 aaKnown RBP8.56□□□□□ -1.04
NEDD9-211ENST00000508546 PERPQ96FX8 193 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 CERS2Q96G23 380 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 RILPQ96NA2 401 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 GNRHR2Q96P88 292 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 GAL3ST4Q96RP7 486 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 PELOQ9BRX2 385 aaKnown RBP8.56□□□□□ -1.04
NEDD9-211ENST00000508546 NAT9Q9BTE0 207 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 MS4A8Q9BY19 250 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 ACBD3Q9H3P7 528 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 C6orf203Q9P0P8 240 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-211ENST00000508546 NPEPPSL1A6NEC2 478 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 MSTNO14793 375 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 CLGNO14967 610 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 PRAMEF4O60810 478 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 CDH16O75309 829 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 PAX1P15863 534 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 ALOX15P16050 662 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-211ENST00000508546 CD22P20273 847 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 CRYGSP22914 178 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 GALNSP34059 522 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 GGT5P36269 586 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 CASP3P42574 277 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 PTH2RP49190 550 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 TMED10P49755 219 aaKnown RBP8.55□□□□□ -1.04
NEDD9-211ENST00000508546 FBXW4P57775 412 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 HERVK_113P63132 956 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 ERVK-8P63133 956 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 LAPTM5Q13571 262 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 AP5B1Q2VPB7 878 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 C18orf21Q32NC0 220 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-211ENST00000508546 TMEM35AQ53FP2 167 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 WIPI1Q5MNZ9 446 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-211ENST00000508546 PRAMEF9Q5VWM5 478 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 TIGD3Q6B0B8 471 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 OR4N5Q8IXE1 308 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF441Q8N8Z8 693 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 FAM83FQ8NEG4 500 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-211ENST00000508546 SLC44A1Q8WWI5 657 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 IGFBPL1Q8WX77 278 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 TANKQ92844 425 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 WNT2BQ93097 391 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 TP53INP1Q96A56 240 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 PPWD1Q96BP3 646 aaKnown RBP8.55□□□□□ -1.04
NEDD9-211ENST00000508546 INTS12Q96CB8 462 aaKnown RBP8.55□□□□□ -1.04
NEDD9-211ENST00000508546 TMEM41AQ96HV5 264 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 VPS39Q96JC1 886 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 WFIKKN1Q96NZ8 548 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 TUBA1CQ9BQE3 449 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 EFCAB11Q9BUY7 163 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 ERVK-6Q9BXR3 956 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 RPF2Q9H7B2 306 aaKnown RBP8.55□□□□□ -1.04
NEDD9-211ENST00000508546 UBTD1Q9HAC8 227 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 SNX15Q9NRS6 342 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 DNAJC11Q9NVH1 559 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 MS4A12Q9NXJ0 267 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF226Q9NYT6 803 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 PACSIN3Q9UKS6 424 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 ERVK-19Q9WJR5 959 aa8.55□□□□□ -1.04
NEDD9-211ENST00000508546 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 RTCAO00442 366 aaKnown RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TNFSF13O75888 250 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 CLPSP04118 112 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 CHMP24386 653 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 PTPN6P29350 595 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 CASQ1P31415 396 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 GCKP35557 465 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 CASP2P42575 452 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 RPP38P78345 283 aaKnown RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TNFRSF17Q02223 184 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 DOC2AQ14183 400 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 E2F2Q14209 437 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF267Q14586 743 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TOMM20Q15388 145 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TGFBIQ15582 683 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TSNQ15631 228 aaKnown RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TBCCQ15814 346 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 PAGE2BQ5JRK9 111 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 CDKL4Q5MAI5 379 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 RNASEH2BQ5TBB1 312 aaKnown RBP8.54□□□□□ -1.04
NEDD9-211ENST00000508546 TMEM81Q6P7N7 255 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 ENPP6Q6UWR7 440 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 FRA10AC1Q70Z53 315 aa8.54□□□□□ -1.04
NEDD9-211ENST00000508546 PPIL6Q8IXY8 311 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms