RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MEX3DQ86XN8 651 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 TIGD4Q8IY51 512 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 SLC43A2Q8N370 569 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 RIT1Q92963 219 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 CNDP2Q96KP4 475 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 PRMT1Q99873 361 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 INPP5KQ9BT40 448 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 ZNF256Q9Y2P7 627 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 MRPL11Q9Y3B7 192 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 TRIOO75962 3097 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 CFAP47Q6ZTR5 3102 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 ROCK2O75116 1388 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 RTL9Q8NET4 1388 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 SETXQ7Z333 2677 aaKnown RBP3.84□□□□□ -1.8
TOPBP1-206ENST00000508524 COL4A1P02462 1669 aa3.84□□□□□ -1.8
TOPBP1-206ENST00000508524 ALPK3Q96L96 1907 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 BCLAF3A2AJT9 711 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 C5orf52A6NGY3 159 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 P2RX6O15547 441 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 PLOD3O60568 738 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 QDPRP09417 244 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 FAM58BPP0C7Q3 252 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 SLC1A3P43003 542 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 PEX3P56589 373 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 PPIAP62937 165 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 RPS27AP62979 156 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 RBBP4Q09028 425 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 RFTN2Q52LD8 501 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 UTF1Q5T230 341 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 SPOUT1Q5T280 376 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 NBPF5PQ86XG9 351 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 CREBRFQ8IUR6 639 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 SLC34A3Q8N130 599 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 OR6T1Q8NGN1 323 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 OR6F1Q8NGZ6 308 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 SAP25Q8TEE9 199 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 SLC35C1Q96A29 364 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 TESK2Q96S53 571 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 LIME1Q9H400 295 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 UMODL1Q5DID0 1318 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 CDHR2Q9BYE9 1310 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 RIC1Q4ADV7 1423 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 SSC5DA1L4H1 1573 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 DCHS1Q96JQ0 3298 aa3.83□□□□□ -1.8
TOPBP1-206ENST00000508524 KIF20BQ96Q89 1820 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 ZNF253O75346 499 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 PRG2P13727 222 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 SPRP35270 261 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 LYZP61626 148 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 PCK2Q16822 640 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 VWA2Q5GFL6 755 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 ARMCX4Q5H9R4 360 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 NUFIP2Q7Z417 695 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 ZNRF1Q8ND25 227 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 BPIFA2Q96DR5 249 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 TRANK1O15050 2925 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 KMT2BQ9UMN6 2715 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 CACNA1BQ00975 2339 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 SCN9AQ15858 1988 aa3.82□□□□□ -1.8
TOPBP1-206ENST00000508524 TEX48A0A1B0GUV7 120 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 FIBPO43427 364 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 FRAT2O75474 233 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 KBTBD11O94819 623 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 HSP90AB1P08238 724 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 BDNFP23560 247 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 NUCB1Q02818 461 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 FASTKQ14296 549 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 LRIT3Q3SXY7 679 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 RFPL4BQ6ZWI9 263 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 SPATA21Q7Z572 469 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 PHLDB2Q86SQ0 1253 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 TBC1D10CQ8IV04 446 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 OR8H2Q8N162 312 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 TMEM99Q8N816 258 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 OR13C5Q8NGS8 318 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 PCNPQ8WW12 178 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 DCPSQ96C86 337 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 RANBP9Q96S59 729 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 SP140LQ9H930 580 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 NMUR1Q9HB89 426 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 ANAPC11Q9NYG5 84 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 NFKBIL1Q9UBC1 381 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 MGAT4AQ9UM21 535 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 SH3GLB1Q9Y371 365 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 CPQQ9Y646 472 aa3.81□□□□□ -1.8
TOPBP1-206ENST00000508524 ZFHX2Q9C0A1 2572 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 UBN2Q6ZU65 1347 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 C2orf92A0A1B0GVN3 265 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 HTR3EA5X5Y0 456 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 SRRM4A7MD48 611 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 SCO2O43819 266 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 SELENOFO60613 162 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 GIG44P09565 113 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 TNNT2P45379 298 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 CETN1Q12798 172 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 GPR50Q13585 617 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 TIMM50Q3ZCQ8 353 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 RSBN1Q5VWQ0 802 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms