RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 ULK1O75385 1050 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 CRCPO75575 148 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 SNUPNO95149 360 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 ABOP16442 354 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 CHRNB4P30926 498 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 HOXC12P31275 282 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 GALNSP34059 522 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 BSGP35613 385 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 DEKP35659 375 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 CD96P40200 585 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 MEOX1P50221 254 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 SLC26A5P58743 744 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 STX4Q12846 297 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 SLC13A2Q13183 592 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 SLAMF1Q13291 335 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 MEP1AQ16819 746 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 SPIN4Q56A73 249 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 EMC4Q5J8M3 183 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 ABHD17BQ5VST6 288 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 MRM1Q6IN84 353 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 ADNP2Q6IQ32 1131 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 LETMD1Q6P1Q0 360 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 RNF165Q6ZSG1 346 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 FRMD7Q6ZUT3 714 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 LANCL3Q6ZV70 420 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 CD163Q86VB7 1156 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 GHDCQ8N2G8 530 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 METTL4Q8N3J2 472 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 OR2W6PQ8NHA6 318 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 OR14A16Q8NHC5 309 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 TSLPQ969D9 159 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 C18orf12Q96KH6 178 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 CDK15Q96Q40 435 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 GSTO2Q9H4Y5 243 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 KLHL1Q9NR64 748 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 ANKRD10Q9NXR5 420 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 DNAJB12Q9NXW2 375 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 LRFN1Q9P244 771 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 VPS29Q9UBQ0 182 aa8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 WBP11Q9Y2W2 641 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-223ENST00000508249 GOLGA6L10A6NI86 522 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 RTCAO00442 366 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 MANBAO00462 879 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 TM9SF1O15321 606 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CTIFO43310 598 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 NPHS1O60500 1241 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 SEC24DO94855 1032 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 OR4F21O95013 312 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CHEK2O96017 543 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 B3GALT4O96024 378 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 INHBBP09529 407 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 NR2F6P10588 404 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 NEFHP12036 1026 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CLCN2P51788 898 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 NAGLUP54802 743 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 IGLV3-21P80748 117 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 PLIN5Q00G26 463 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 ZNF844Q08AG5 666 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 OR1C1Q15619 314 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 ACER2Q5QJU3 275 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 SPINK14Q6IE38 97 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 OR52E8Q6IFG1 317 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 GALNTL5Q7Z4T8 443 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CRLF3Q8IUI8 442 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CCDC71Q8IV32 467 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 SAMD14Q8IZD0 417 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CPSF7Q8N684 471 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 HORMAD2Q8N7B1 307 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CCNYL1Q8N7R7 359 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CDYL2Q8N8U2 506 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 FAM47BQ8NA70 645 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 MORN4Q8NDC4 146 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 B3GNT7Q8NFL0 401 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 OR8K3Q8NH51 312 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 SUN3Q8TAQ9 357 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 FAM76AQ8TAV0 307 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 FAM57AQ8TBR7 257 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 ELP5Q8TE02 316 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 PGM2Q96G03 612 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 VMP1Q96GC9 406 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 MAPKAP1Q9BPZ7 522 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 GPATCH1Q9BRR8 931 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 FAIM2Q9BWQ8 316 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 ZNF717Q9BY31 904 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 RPF2Q9H7B2 306 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 KCNK13Q9HB14 408 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 EML4Q9HC35 981 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 MID1IP1Q9NPA3 183 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 NECTIN3Q9NQS3 549 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 SIRT5Q9NXA8 310 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 STMN3Q9NZ72 180 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 COQ3Q9NZJ6 369 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 VTI1BQ9UEU0 232 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 MCM8Q9UJA3 840 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 FBXW2Q9UKT8 454 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 PSME2Q9UL46 239 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 SLC12A4Q9UP95 1085 aa8.54□□□□□ -1.04
UBE2D3-223ENST00000508249 CLCA3PQ9Y6N3 262 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms