RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 SYNDIG1LA6NDD5 238 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 TMEM229AB2RXF0 380 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 CCNT2O60583 730 aaKnown RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 CLEC3AO75596 197 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 CNOT4O95628 575 aaKnown RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 C1QAP02745 245 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 ALOX15P16050 662 aaPredicted RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 BMP7P18075 431 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 KRT15P19012 456 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 CD33P20138 364 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 ATP5A1P25705 553 aaKnown RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 HPDP32754 393 aaPredicted RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 SOX18P35713 384 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 MAGEA6P43360 314 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 STT3AP46977 705 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 KCNC1P48547 511 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 CDK9P50750 372 aaKnown RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 RAP1GDS1P52306 607 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 SIRPAP78324 504 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 PLIN5Q00G26 463 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 TNP2Q05952 138 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 SLAMF1Q13291 335 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 DOC2AQ14183 400 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 SF3B4Q15427 424 aaKnown RBP eCLIP5.26□□□□□ -1.577e-8■■■■■ 35
GYPB-208ENST00000507009 HIST2H2ACQ16777 129 aaPredicted RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 PPP1R3AQ16821 1122 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 MPEG1Q2M385 716 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 AP5B1Q2VPB7 878 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 SPANXN3Q5MJ09 141 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 C10orf62Q5T681 223 aaPredicted RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 HLA-DQA1Q5Y7H0 255 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 C18orf63Q68DL7 685 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 HIST2H2AA3Q6FI13 130 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 SYDE1Q6ZW31 735 aaPredicted RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 ZNF550Q7Z398 422 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 P4HA3Q7Z4N8 544 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 UBE3DQ7Z6J8 389 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 PPIL6Q8IXY8 311 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 SPATA6LQ8N4H0 392 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 NKAPQ8N5F7 415 aaKnown RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 CNEP1R1Q8N9A8 125 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 NAT8LQ8N9F0 302 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 ACOT4Q8N9L9 421 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 MCUQ8NE86 351 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 OR14L1PQ8NHC6 308 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 NUBPLQ8TB37 319 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 PIGTQ969N2 578 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 ISL2Q96A47 359 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 RBM18Q96H35 190 aaKnown RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 WDYHV1Q96HA8 205 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 MS4A14Q96JA4 679 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 ART5Q96L15 291 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 DACH2Q96NX9 599 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 KCNC2Q96PR1 638 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 TUBA1CQ9BQE3 449 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 PIGQQ9BRB3 760 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 PHACTR1Q9C0D0 580 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 WWTR1Q9GZV5 400 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 PRDM14Q9GZV8 571 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 RPF2Q9H7B2 306 aaKnown RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 METTL7AQ9H8H3 244 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 LYRM4Q9HD34 91 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 SH2D2AQ9NP31 389 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 PRDM7Q9NQW5 492 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 DNAJC11Q9NVH1 559 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.26□□□□□ -1.57
GYPB-208ENST00000507009 TEX10Q9NXF1 929 aaPredicted RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 QPCTLQ9NXS2 382 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 ASIC3Q9UHC3 531 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 ZNF490Q9ULM2 529 aaPredicted RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 MAPRE3Q9UPY8 281 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 CHMP2BQ9UQN3 213 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 OARD1Q9Y530 152 aa5.26□□□□□ -1.57
GYPB-208ENST00000507009 FBN1P35555 2871 aaKnown RBP5.26□□□□□ -1.57
GYPB-208ENST00000507009 UQCRHLA0A096LP55 91 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 C2orf92A0A1B0GVN3 265 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 FAM95CA0A1B0GW59 222 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 MBD3L4A6NDZ8 208 aaPredicted RBP5.25□□□□□ -1.57
GYPB-208ENST00000507009 MBD3L3A6NE82 208 aaPredicted RBP5.25□□□□□ -1.57
GYPB-208ENST00000507009 MBD3L5A6NJ08 208 aaPredicted RBP5.25□□□□□ -1.57
GYPB-208ENST00000507009 CD8B2A6NJW9 211 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 WASHC1A8K0Z3 465 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 TP53I11O14683 189 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 PRAMEF4O60810 478 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 TRIM3O75382 744 aaPredicted RBP5.25□□□□□ -1.57
GYPB-208ENST00000507009 TBX6O95947 436 aaPredicted RBP5.25□□□□□ -1.57
GYPB-208ENST00000507009 S100BP04271 92 aaPredicted RBP5.25□□□□□ -1.57
GYPB-208ENST00000507009 ZNF37AP17032 561 aaPredicted RBP5.25□□□□□ -1.57
GYPB-208ENST00000507009 HIST1H1TP22492 207 aaPredicted RBP5.25□□□□□ -1.57
GYPB-208ENST00000507009 SSTR4P31391 388 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 GCKP35557 465 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 MAGEA3P43357 314 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 SLCO1A2P46721 670 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 SLC6A12P48065 614 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 KCNJ5P48544 419 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 STARP49675 285 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 HNMTP50135 292 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 NAGLUP54802 743 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 SLC12A2P55011 1212 aa5.25□□□□□ -1.57
GYPB-208ENST00000507009 DIO3P55073 304 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms