RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CXorf21Q9HAI6 301 aa9.17□□□□□ -0.94
NR1I3-220ENST00000505005 SLC35C2Q9NQQ7 365 aa9.17□□□□□ -0.94
NR1I3-220ENST00000505005 CNIH4Q9P003 139 aa9.17□□□□□ -0.94
NR1I3-220ENST00000505005 HAO1Q9UJM8 370 aa9.17□□□□□ -0.94
NR1I3-220ENST00000505005 PCDHGA10Q9Y5H3 936 aa9.17□□□□□ -0.94
NR1I3-220ENST00000505005 CROCCQ5TZA2 2017 aa9.17□□□□□ -0.94
NR1I3-220ENST00000505005 LOC400499M0QZD8 3231 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 A0A087WV62 115 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 ACOT7O00154 380 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 DNAJB6O75190 326 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 C1QL1O75973 258 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 WISP1O95388 367 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 IGKV3-11P04433 115 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 SP1P08047 785 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 EDN3P14138 238 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 NR1D1P20393 614 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 PRPS1L1P21108 318 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 KRT20P35900 424 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 CASP6P55212 293 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 HMGCS1Q01581 520 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 EMX2Q04743 252 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 TUBA3CQ13748 450 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 ZNF267Q14586 743 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-220ENST00000505005 OR1C1Q15619 314 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 VPS26BQ4G0F5 336 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 PIGGQ5H8A4 983 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 MTFR2Q6P444 385 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 ZCCHC12Q6PEW1 402 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 TUBA3EQ6PEY2 450 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 RTL4Q6ZR62 310 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 GK5Q6ZS86 529 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 RPS27LQ71UM5 84 aaKnown RBP9.16□□□□□ -0.94
NR1I3-220ENST00000505005 WDR75Q8IWA0 830 aaKnown RBP9.16□□□□□ -0.94
NR1I3-220ENST00000505005 CYP4Z2PQ8N1L4 340 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 BEST3Q8N1M1 668 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 RNF175Q8N4F7 328 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 ZNF721Q8TF20 911 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 FAR1Q8WVX9 515 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 ARL8AQ96BM9 186 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 MOAP1Q96BY2 351 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 TUBGCP3Q96CW5 907 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 APIPQ96GX9 242 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 CNPPD1Q9BV87 410 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 OR10A5Q9H207 317 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 REEP4Q9H6H4 257 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 MANSC1Q9H8J5 431 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 ACSS1Q9NUB1 689 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-220ENST00000505005 TEX10Q9NXF1 929 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-220ENST00000505005 ASIC5Q9NY37 505 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
NR1I3-220ENST00000505005 MAP10Q9P2G4 905 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 CES1P1Q9UKY3 287 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 PCDHGB4Q9UN71 923 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 PCDHGB3Q9Y5G1 929 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 CLDN16Q9Y5I7 305 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
NR1I3-220ENST00000505005 TLN1Q9Y490 2541 aaKnown RBP9.15□□□□□ -0.94
NR1I3-220ENST00000505005 CPAMD8Q8IZJ3 1885 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 PLOD2O00469 737 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 LSM1O15116 133 aaKnown RBP9.15□□□□□ -0.94
NR1I3-220ENST00000505005 PGRMC2O15173 223 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 GPR37O15354 613 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 PLOD3O60568 738 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 SLC25A12O75746 678 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 TGDSO95455 350 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 DDAH2O95865 285 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 GBAP04062 536 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 P04436 131 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 IL3P08700 152 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 KRT16P08779 473 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 LINC00032P0C843 101 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 PLA2G2AP14555 144 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 CD96P40200 585 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 HNRNPFP52597 415 aaKnown RBP9.15□□□□□ -0.94
NR1I3-220ENST00000505005 CLNS1AP54105 237 aaKnown RBP9.15□□□□□ -0.94
NR1I3-220ENST00000505005 FOXA1P55317 472 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 PER3P56645 1201 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 SLC37A1P57057 533 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 FOXL2P58012 376 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 ERVK-8P63133 956 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 MLC1Q15049 377 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 KIAA0040Q15053 153 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 UGT3A2Q3SY77 523 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 NADK2Q4G0N4 442 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 SLC22A10Q63ZE4 541 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 CLEC6AQ6EIG7 209 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 FAM71E1Q6IPT2 247 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 Q6ZSR9 355 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 SPATA19Q7Z5L4 167 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 ANKRD42Q8N9B4 389 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 FNDC5Q8NAU1 212 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 ST6GALNAC3Q8NDV1 305 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 TMEM52Q8NDY8 209 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 LRRC8CQ8TDW0 803 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 PPCDCQ96CD2 204 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 C19orf60Q96EN9 201 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 SCMH1Q96GD3 660 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 FCRL1Q96LA6 429 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 KCNA7Q96RP8 456 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 SIKE1Q9BRV8 207 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms