RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 IPCEF1Q8WWN9 437 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 NR4A3Q92570 626 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 RORBQ92753 470 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 FKBP10Q96AY3 582 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SLCO4A1Q96BD0 722 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 TBC1D20Q96BZ9 403 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 FBXL8Q96CD0 374 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CERS2Q96G23 380 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 REXO5Q96IC2 774 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 THOC3Q96J01 351 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 TEKT5Q96M29 485 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 GPR22Q99680 433 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 RBM4BQ9BQ04 359 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 RBM4Q9BWF3 364 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 FUNDC2Q9BWH2 189 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 POLDIP3Q9BY77 421 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 CEP41Q9BYV8 373 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 RACGAP1Q9H0H5 632 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 C12orf65Q9H3J6 166 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 DSN1Q9H410 356 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 FAM83DQ9H4H8 585 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ARMC7Q9H6L4 198 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 NIPAL2Q9H841 368 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 NOL11Q9H8H0 719 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 LIN7BQ9HAP6 207 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 GLOD4Q9HC38 313 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SYTL2Q9HCH5 934 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 HRASLS2Q9NWW9 162 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 PTGFRNQ9P2B2 879 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ZNF624Q9P2J8 865 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 SAE1Q9UBE0 346 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 FAM8A1Q9UBU6 413 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 WARS2Q9UGM6 360 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 PHF11Q9UIL8 331 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 FBXL4Q9UKA2 621 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 FBXO5Q9UKT4 447 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 PPT2Q9UMR5 302 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 TRAPPC4Q9Y296 219 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 TPRKBQ9Y3C4 175 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ORC6Q9Y5N6 252 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CORINQ9Y5Q5 1042 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 AP1M2Q9Y6Q5 423 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SPG11Q96JI7 2443 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 A0A096LPK6 155 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 LOC105371267A0A1B0GV96 52 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 TCRBV7S3A2A0A539 114 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 GSAPA4D1B5 854 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 OR5K3A6NET4 321 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 PRORSD1PA6NEY8 169 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 SLC9B1P1A6NJY1 282 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 SNTNA6NMZ2 147 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 GPR89AB7ZAQ6 455 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 INAFM1C9JVW0 142 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 E7EQ34 232 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 AURKAO14965 403 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 CFLARO15519 480 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 ZNF749O43361 778 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 ICMTO60725 284 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 TMCC2O75069 709 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 BANF1O75531 89 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 UGT2B17O75795 530 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 TSPAN9O75954 239 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 EPOP01588 193 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 IGHEP01854 428 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 PIRTP0C851 137 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 GPR89BP0CG08 455 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 ITGAMP11215 1152 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 HOXB1P14653 301 aaPredicted RBP4.88□□□□□ -1.63
HTT-202ENST00000502820 FOSL1P15407 271 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 ABOP16442 354 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 MATN1P21941 496 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 ALAS2P22557 587 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 ATP5F1P24539 256 aaPredicted RBP4.88□□□□□ -1.63
HTT-202ENST00000502820 MST1P26927 711 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 HMGCLP35914 325 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 GRIA3P42263 894 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 PREPP48147 710 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 NPY2RP49146 381 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 ARSFP54793 590 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 UGT2B15P54855 530 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 CDH13P55290 713 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 CDH15P55291 814 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 PKNOX1P55347 436 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 WNT3AP56704 352 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 DYNLT1P63172 113 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 UBE2IP63279 158 aaKnown RBP4.88□□□□□ -1.63
HTT-202ENST00000502820 PMP22Q01453 160 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 AIMP2Q13155 320 aaKnown RBP4.88□□□□□ -1.63
HTT-202ENST00000502820 SNTB1Q13884 538 aaKnown RBP4.88□□□□□ -1.63
HTT-202ENST00000502820 KRT33BQ14525 404 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 TSC22D1Q15714 1073 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 NEDD8Q15843 81 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 CTF1Q16619 201 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 ZNF404Q494X3 552 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 SYT6Q5T7P8 510 aaPredicted RBP4.88□□□□□ -1.63
HTT-202ENST00000502820 PRAMEF13Q5VWM6 474 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 B3GNTL1Q67FW5 361 aaPredicted RBP4.88□□□□□ -1.63
HTT-202ENST00000502820 HMBOX1Q6NT76 420 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 FAM198BQ6UWH4 519 aa4.88□□□□□ -1.63
HTT-202ENST00000502820 SLC16A12Q6ZSM3 486 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms