RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SIRPAP78324 504 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 BASP1P80723 227 aaKnown RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 BST1Q10588 318 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 BST2Q10589 180 aaKnown RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 ITGA9Q13797 1035 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 SIM2Q14190 667 aaPredicted RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 IRF3Q14653 427 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 RFTN1Q14699 578 aaPredicted RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 TMEM132DQ14C87 1099 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 PAFAH1B3Q15102 231 aaKnown RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 PDK1Q15118 436 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 ZNF876PQ49A33 203 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 CCDC14Q49A88 953 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 ACSBG2Q5FVE4 666 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 SPANXN3Q5MJ09 141 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 GRTP1Q5TC63 336 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 OR52E8Q6IFG1 317 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 LINGO4Q6UY18 593 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 LRRC74BQ6ZQY2 392 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 SZRD1Q7Z422 152 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 TMEM135Q86UB9 458 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 LRRC49Q8IUZ0 686 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 NUDCD3Q8IVD9 361 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 GPATCH11Q8N954 259 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 STKLD1Q8NE28 680 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 CATSPER1Q8NEC5 780 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 PPTC7Q8NI37 304 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 PDCD6IPQ8WUM4 868 aaKnown RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 RXFP2Q8WXD0 754 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 TOP1MTQ969P6 601 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 AZIN2Q96A70 460 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 ZNF501Q96CX3 271 aaPredicted RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 SPDL1Q96EA4 605 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 DTNBP1Q96EV8 351 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 HPDLQ96IR7 371 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 SERAC1Q96JX3 654 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 FAM111AQ96PZ2 611 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 PEBP4Q96S96 227 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 CPNE1Q99829 537 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 SH3GL3Q99963 347 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 SRSF8Q9BRL6 282 aaKnown RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 TRIM62Q9BVG3 475 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 CCDC106Q9BWC9 280 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 NMUR2Q9GZQ4 415 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 ELOVL4Q9GZR5 314 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 MRPL40Q9NQ50 206 aaKnown RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.38□□□□□ -1.71
SSR3-209ENST00000498205 NMRK1Q9NWW6 199 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 ARHGEF38Q9NXL2 777 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 PRPF19Q9UMS4 504 aaKnown RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 STK38LQ9Y2H1 464 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 GRIP1Q9Y3R0 1128 aa4.38□□□□□ -1.71
SSR3-209ENST00000498205 PDCD11Q14690 1871 aaKnown RBP4.38□□□□□ -1.71
SSR3-209ENST00000498205 A0A0G2JND7 137 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 KPNA7A9QM74 516 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 M0QYV0 167 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 TIMM44O43615 452 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CACNG3O60359 315 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 PRAMEF11O60813 436 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 ENTPD5O75356 428 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 AVILO75366 819 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 TADA2AO75478 443 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CSPG5O95196 566 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 PENKP01210 267 aaPredicted RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 AMBPP02760 352 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 PABPC4LP0CB38 370 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 CSH1P0DML2 217 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CSH2P0DML3 217 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CXCL8P10145 99 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 ETS1P14921 441 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 LIFP15018 202 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CPA3P15088 417 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 KCNE1P15382 129 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CKMT2P17540 419 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 MSH3P20585 1137 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 NMBRP28336 390 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 SPRP35270 261 aaPredicted RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 GP5P40197 560 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 SLC26A3P40879 764 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 MATKP42679 507 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 GMPSP49915 693 aaPredicted RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 NAA20P61599 178 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 YWHAGP61981 247 aaKnown RBP eCLIP4.37□□□□□ -1.71
SSR3-209ENST00000498205 ASPHQ12797 758 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 STX3Q13277 289 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 PPIL2Q13356 520 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 DYNC1I2Q13409 638 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 RCN1Q15293 331 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 UGP2Q16851 508 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 SLC25A52Q3SY17 297 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 FAM98BQ52LJ0 330 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 C2CD6Q53TS8 623 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CYP4A22Q5TCH4 519 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 ALKAL1Q6UXT8 129 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 RBMS3Q6XE24 437 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 DGLUCYQ7Z3D6 616 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 ERO1BQ86YB8 467 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 PLD3Q8IV08 490 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CNTN4Q8IWV2 1026 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms