RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	CAPZA2	P47755	286 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	MEF2A	Q02078	507 aa	Predicted RBP	10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PCDH1	Q08174	1060 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TAF10	Q12962	218 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ZNF177	Q13360	481 aa	Predicted RBP	10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	DUSP6	Q16828	381 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	COL28A1	Q2UY09	1125 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	MARCH8	Q5T0T0	291 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	KIAA1841	Q6NSI8	718 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SMARCD3	Q6STE5	483 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PRSS45	Q7RTY3	260 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SYT9	Q86SS6	491 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	GPR135	Q8IZ08	494 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RBFA	Q8N0V3	343 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TMEM86A	Q8N2M4	240 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CSGALNACT1	Q8TDX6	532 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	C1orf74	Q96LT6	269 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PRR14	Q9BWN1	585 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CNOT2	Q9NZN8	540 aa	Known RBP	10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ENOPH1	Q9UHY7	261 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ADAMTS5	Q9UNA0	930 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CCL27	Q9Y4X3	112 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CACNG2	Q9Y698	323 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CHD5	Q8TDI0	1954 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	VCAN	P13611	3396 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CLDN7	O95471	211 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TGFB1	P01137	390 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ACADM	P11310	421 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	BDKRB1	P46663	353 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	LSM11	P83369	360 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	MLLT11	Q13015	90 aa	Predicted RBP	10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TEAD4	Q15561	434 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CHRNA6	Q15825	494 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SHE	Q5VZ18	495 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PLEKHH3	Q7Z736	793 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	IQCH	Q86VS3	1027 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	STPG2	Q8N412	459 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RELL2	Q8NC24	303 aa	Predicted RBP	10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	XAGE5	Q8WWM1	108 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	MS4A3	Q96HJ5	214 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RBP7	Q96R05	134 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	YIPF4	Q9BSR8	244 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TMEM138	Q9NPI0	162 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ACER3	Q9NUN7	267 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ALPK2	Q86TB3	2170 aa		10.1	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TRAV20	A0A0B4J274	112 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SH3D21	A4FU49	640 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PGRMC2	O15173	223 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	MMP20	O60882	483 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TF	P02787	698 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RLN1	P04808	185 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	GPX2	P18283	190 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	HMGCL	P35914	325 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	BUD31	P41223	144 aa	Predicted RBP	10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CLCNKA	P51800	687 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	WNT4	P56705	351 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	HYAL4	Q2M3T9	481 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SPOUT1	Q5T280	376 aa	Known RBP	10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RNF219	Q5W0B1	726 aa	Predicted RBP	10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	GPR139	Q6DWJ6	353 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	AGMO	Q6ZNB7	445 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	GDPGP1	Q6ZNW5	385 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ADGRF3	Q8IZF5	1079 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PROKR2	Q8NFJ6	384 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	OR52I1	Q8NGK6	324 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	OR8J1	Q8NGP2	316 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	MARVELD1	Q9BSK0	173 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CD93	Q9NPY3	652 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	KCTD5	Q9NXV2	234 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	C5AR2	Q9P296	337 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	DIMT1	Q9UNQ2	313 aa	Known RBP	10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	NEU3	Q9UQ49	428 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ANGPT4	Q9Y264	503 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CDH10	Q9Y6N8	788 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	MCM3AP	O60318	1980 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597		A0A0G2JPF8	293 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ZNF98	A6NK75	572 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	HNRNPCL3	B7ZW38	293 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597		H3BSH0	61 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PRAMEF11	O60813	436 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	HNRNPCL4	P0DMR1	293 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RRAS	P10301	218 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CBR1	P16152	277 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	GABRB1	P18505	474 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RAB3B	P20337	219 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PTPN6	P29350	595 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	OR1G1	P47890	313 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CSNK1D	P48730	415 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	HBA1	P69905	142 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CACNG1	Q06432	222 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SLC5A12	Q1EHB4	618 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RAB41	Q5JT25	222 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TCTE1	Q5JU00	501 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	NLRC3	Q7RTR2	1065 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	TMPRSS11B	Q86T26	416 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SYNPO	Q8N3V7	929 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	NANOGP1	Q8N7R0	232 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	DNAJB8	Q8NHS0	232 aa		10.09	□□□□□ -0.79

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