RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 HIST1H2AGP0C0S8 130 aaPredicted RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 ACPPP15309 386 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 HIST1H2ADP20671 130 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 PPIBP23284 216 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 AKAP5P24588 427 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 GABRA5P31644 462 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 RFX3P48380 749 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 HNMTP50135 292 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 RPS14P62263 151 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 CRYZQ08257 329 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 STX4Q12846 297 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 OCLNQ16625 522 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 HIST2H2AA3Q6FI13 130 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 PDE12Q6L8Q7 609 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 SEZ6L2Q6UXD5 910 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 TMPRSS9Q7Z410 1059 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 MILR1Q7Z6M3 343 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 LDB1Q86U70 411 aaPredicted RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 JAZF1Q86VZ6 243 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 DENND1CQ8IV53 801 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 SPNS2Q8IVW8 549 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 FAM217AQ8IXS0 508 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 TDHQ8IZJ6 230 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 LGI4Q8N135 537 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 TMEM130Q8N3G9 435 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 MOSPD2Q8NHP6 518 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 HIST1H2AHQ96KK5 128 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 HHIPQ96QV1 700 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 HIST1H2AJQ99878 128 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 THAP7Q9BT49 309 aaPredicted RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 GSN-AS1Q9NRJ2 163 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 THSD1Q9NS62 852 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 NUDT15Q9NV35 164 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 PPIEQ9UNP9 301 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 EXO1Q9UQ84 846 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 SF3B6Q9Y3B4 125 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 PTPRSQ13332 1948 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 PLSCR5A0PG75 271 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 I6L893 689 aaPredicted RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 L7N2F9 121 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CASKO14936 926 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SMAD6O43541 496 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 LDB2O43679 373 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 RPLP2P05387 115 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 JUPP14923 745 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 GALP22466 123 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ACSL1P33121 698 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 BTCP35070 178 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 RFC3P40938 356 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 STARP49675 285 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 GDI2P50395 445 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 CDC42EP1Q00587 391 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 FGL2Q14314 439 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 GSG1Q2KHT4 349 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ZNF648Q5T619 568 aaPredicted RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 USP30Q70CQ3 517 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ZNF551Q7Z340 670 aaPredicted RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 C12orf40Q86WS4 652 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 PTOV1Q86YD1 416 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SYNPOQ8N3V7 929 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ELP5Q8TE02 316 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 NUDT8Q8WV74 236 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 NELL1Q92832 810 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 MRPS24Q96EL2 167 aaKnown RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 LRRC46Q96FV0 321 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CXorf58Q96LI9 332 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 PKMYT1Q99640 499 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 NIPSNAP1Q9BPW8 284 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 C1QTNF6Q9BXI9 259 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 OR51M1Q9H341 326 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ATXN3LQ9H3M9 355 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 CERS4Q9HA82 394 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 DNAJC11Q9NVH1 559 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 NDUFAF4Q9P032 175 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 DPP7Q9UHL4 492 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 A0A0G2JPF8 293 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 NPEPPSL1A6NEC2 478 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 TRABD2BA6NFA1 517 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 HNRNPCL3B7ZW38 293 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 OR7A17O14581 309 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SDC3O75056 442 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ENTPD6O75354 484 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 HNRNPCL4P0DMR1 293 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 HOXC13P31276 330 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 TSPAN5P62079 268 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SELENOWP63302 87 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 GTF2H2Q13888 395 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 DUOXA1Q1HG43 343 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ZNF528Q3MIS6 628 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 SLC25A30Q5SVS4 291 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 UBXN11Q5T124 520 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 MANEALQ5VSG8 457 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 GTF2H2CQ6P1K8 395 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 BTN2A1Q7KYR7 527 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 GOLGA7Q7Z5G4 137 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 LRRC28Q86X40 367 aaPredicted RBP8.61□□□□□ -1.03
HPS4-217ENST00000496385 KRTCAP2Q8N6L1 136 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 ZNF454Q8N9F8 522 aa8.61□□□□□ -1.03
HPS4-217ENST00000496385 DMBX1Q8NFW5 382 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms