RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 CUL3Q13618 768 aa16.33■□□□□ 0.2
YIPF3-208ENST00000490447 SNTB1Q13884 538 aaKnown RBP16.33■□□□□ 0.2
YIPF3-208ENST00000490447 KLC3Q6P597 504 aa16.33■□□□□ 0.2
YIPF3-208ENST00000490447 SPATA4Q8NEY3 305 aa16.33■□□□□ 0.2
YIPF3-208ENST00000490447 FOXC2Q99958 501 aa16.33■□□□□ 0.2
YIPF3-208ENST00000490447 GPATCH1Q9BRR8 931 aaKnown RBP16.33■□□□□ 0.2
YIPF3-208ENST00000490447 RAB17Q9H0T7 212 aa16.33■□□□□ 0.2
YIPF3-208ENST00000490447 DDX31Q9H8H2 851 aaKnown RBP16.33■□□□□ 0.2
YIPF3-208ENST00000490447 PROK2Q9HC23 129 aa16.33■□□□□ 0.2
YIPF3-208ENST00000490447 SNX15Q9NRS6 342 aa16.33■□□□□ 0.2
YIPF3-208ENST00000490447 CCM2LQ9NUG4 571 aaPredicted RBP16.33■□□□□ 0.2
YIPF3-208ENST00000490447 CNOT11Q9UKZ1 510 aaKnown RBP16.33■□□□□ 0.2
YIPF3-208ENST00000490447 ASB4Q9Y574 426 aa16.33■□□□□ 0.2
YIPF3-208ENST00000490447 A0A0A6YYD5 115 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 CCDC189A1A4V9 331 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 ANKRD33BA6NCL7 494 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 AHRRA9YTQ3 701 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 TMPRSS11DO60235 418 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 EEDO75530 441 aaKnown RBP16.32■□□□□ 0.2
YIPF3-208ENST00000490447 KRT38O76015 456 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 AIFM1O95831 613 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 SLC35E2P0CK97 266 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 MTHFD2P13995 350 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 PIK3R1P27986 724 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 MAGEA4P43358 317 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 ASCL1P50553 236 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 PPP2R2AP63151 447 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 IRF9Q00978 393 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 C2orf54Q08AI8 447 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 GTF2H2Q13888 395 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 ACAP2Q15057 778 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 SF3B4Q15427 424 aaKnown RBP eCLIP16.32■□□□□ 0.2
YIPF3-208ENST00000490447 OR52E8Q6IFG1 317 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 MRM1Q6IN84 353 aaKnown RBP16.32■□□□□ 0.2
YIPF3-208ENST00000490447 GTF2H2CQ6P1K8 395 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 PACS2Q86VP3 889 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 GALNT12Q8IXK2 581 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 PM20D2Q8IYS1 436 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 GOT1L1Q8NHS2 421 aaPredicted RBP16.32■□□□□ 0.2
YIPF3-208ENST00000490447 HSPBAP1Q96EW2 488 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 ZNF717Q9BY31 904 aaPredicted RBP16.32■□□□□ 0.2
YIPF3-208ENST00000490447 IPPKQ9H8X2 491 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 CRIM1Q9NZV1 1036 aa16.32■□□□□ 0.2
YIPF3-208ENST00000490447 MTRF1LQ9UGC7 380 aaKnown RBP16.32■□□□□ 0.2
YIPF3-208ENST00000490447 TNPO3Q9Y5L0 923 aaKnown RBP16.32■□□□□ 0.2
YIPF3-208ENST00000490447 A0A1W2PR48 441 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 WASHC1A8K0Z3 465 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 SYT5O00445 386 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 TRIM3O75382 744 aaPredicted RBP16.31■□□□□ 0.2
YIPF3-208ENST00000490447 SNX4O95219 450 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 IL2RAP01589 272 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 SSTR4P31391 388 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 BSGP35613 385 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 FBXW4P57775 412 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 TOMM20Q15388 145 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 ACSF3Q4G176 576 aaPredicted RBP16.31■□□□□ 0.2
YIPF3-208ENST00000490447 FLYWCH1Q4VC44 716 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 MROH9Q5TGP6 573 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 FBXW10Q5XX13 1052 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 GOLGA7Q7Z5G4 137 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 LACC1Q8IV20 430 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 CENPLQ8N0S6 344 aaPredicted RBP16.31■□□□□ 0.2
YIPF3-208ENST00000490447 FBXO25Q8TCJ0 367 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 ATP6V1E2Q96A05 226 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 TP53INP1Q96A56 240 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 MRRFQ96E11 262 aaKnown RBP16.31■□□□□ 0.2
YIPF3-208ENST00000490447 RILPQ96NA2 401 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 RASSF1Q9NS23 344 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 CPSF2Q9P2I0 782 aaKnown RBP16.31■□□□□ 0.2
YIPF3-208ENST00000490447 ST6GALNAC2Q9UJ37 374 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 FOXD3Q9UJU5 478 aaPredicted RBP16.31■□□□□ 0.2
YIPF3-208ENST00000490447 NPFFR2Q9Y5X5 522 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 EML6Q6ZMW3 1958 aa16.31■□□□□ 0.2
YIPF3-208ENST00000490447 FAM221AA4D161 298 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 FOXE1O00358 373 aaPredicted RBP16.3■□□□□ 0.2
YIPF3-208ENST00000490447 EPPINO95925 133 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 GBAP04062 536 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 C2P06681 752 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 KRT15P19012 456 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 DNASE1P24855 282 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 CRYZQ08257 329 aaKnown RBP16.3■□□□□ 0.2
YIPF3-208ENST00000490447 PCBP2Q15366 365 aaKnown RBP eCLIP16.3■□□□□ 0.21e-14■■■□□ 15.8
YIPF3-208ENST00000490447 CEBPEQ15744 281 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 UAP1Q16222 522 aaPredicted RBP16.3■□□□□ 0.2
YIPF3-208ENST00000490447 TMEM64Q6YI46 380 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 SEM1Q6ZVN7 128 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 RELL2Q8NC24 303 aaPredicted RBP16.3■□□□□ 0.2
YIPF3-208ENST00000490447 TNIP2Q8NFZ5 429 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 WDR20Q8TBZ3 569 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 RNASE6Q93091 150 aaKnown RBP16.3■□□□□ 0.2
YIPF3-208ENST00000490447 SECISBP2Q96T21 854 aaKnown RBP16.3■□□□□ 0.2
YIPF3-208ENST00000490447 SERPINI1Q99574 410 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 TIMP4Q99727 224 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 CXXC4Q9H2H0 198 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 CXorf21Q9HAI6 301 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 ZNF358Q9NW07 568 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 PSD3Q9NYI0 1048 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 ZNF629Q9UEG4 869 aaPredicted RBP16.3■□□□□ 0.2
YIPF3-208ENST00000490447 CAMK2AQ9UQM7 478 aa16.3■□□□□ 0.2
YIPF3-208ENST00000490447 RNF11Q9Y3C5 154 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms