RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 HOXC6P09630 235 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 RNF224P0DH78 156 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 GAAP10253 952 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 PAICSP22234 425 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 AHCYP23526 432 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ATP5A1P25705 553 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 TRHRP34981 398 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ARL2P36404 184 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SOX3P41225 446 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 TNFSF9P41273 254 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 BDKRB1P46663 353 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 AFF1P51825 1210 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SMSP52788 366 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ATXN1P54253 815 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 CDKN2DP55273 166 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SPCS3P61009 180 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 RAB4BP61018 213 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 OSTNP61366 133 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 MC2RQ01718 297 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 CACNB2Q08289 660 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 LRRC74AQ0VAA2 488 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ECH1Q13011 328 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SNTB1Q13884 538 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 C1DQ13901 141 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 LRRC32Q14392 662 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 HLXQ14774 488 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 NTRK2Q16620 822 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 GUCA2BQ16661 112 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 GSG1Q2KHT4 349 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF792Q3KQV3 632 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SPDYE7PQ495Y7 208 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SV2CQ496J9 727 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF789Q5FWF6 425 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 DGKKQ5KSL6 1271 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 PRAMEF19Q5SWL8 479 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 C3orf33Q6P1S2 294 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 Q6ZPB1 254 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 FAM217AQ8IXS0 508 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 RNF113BQ8IZP6 322 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 TRPV1Q8NER1 839 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 OR56A4Q8NGH8 313 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 OR52K2Q8NGK3 314 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 OR5M9Q8NGP3 310 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 OR1S1Q8NH92 325 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 STAG3L4Q8TBR4 150 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC35F5Q8WV83 523 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 POF1BQ8WVV4 589 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF668Q96K58 619 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ART5Q96L15 291 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 UBL7Q96S82 380 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ATOH8Q96SQ7 321 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 FEVQ99581 238 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 MAPKAP1Q9BPZ7 522 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 CMSS1Q9BQ75 279 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 DPH2Q9BQC3 489 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 CPPED1Q9BRF8 314 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 THAP7Q9BT49 309 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SARGQ9BW04 601 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 NFKBIZQ9BYH8 718 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 NLNQ9BYT8 704 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ZYG11BQ9C0D3 744 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 POLR2J2Q9GZM3 115 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ABCG5Q9H222 651 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 PORCNQ9H237 461 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC25A32Q9H2D1 315 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 C11orf49Q9H6J7 331 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 MINDY3Q9H8M7 445 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 POPDC3Q9HBV1 291 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ARNT2Q9HBZ2 717 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC25A19Q9HC21 320 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SEMA4BQ9NPR2 832 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 TAS2R16Q9NYV7 291 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 EXTL2Q9UBQ6 330 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC2A6Q9UGQ3 507 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 TSPAN16Q9UKR8 245 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 CLCA2Q9UQC9 943 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 GSTK1Q9Y2Q3 226 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SMCHD1A6NHR9 2005 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 A0A1B0GTL3 188 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RHPN2P1A8MT19 583 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 MCRIP1C9JLW8 97 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 G3V3Q6 166 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 HAS3O00219 553 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 UBE2CO00762 179 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 PHYHO14832 338 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SSNA1O43805 119 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 LCMT2O60294 686 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 NBNO60934 754 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 KERAO60938 352 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SCN2BO60939 215 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CSO75390 466 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 STX11O75558 287 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RGS11O94810 467 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 JCHAINP01591 159 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CRYBA1P05813 215 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ADRA2AP08913 450 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CD63P08962 238 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ZDHHC11BP0C7U3 371 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SPP1P10451 314 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 FOLR2P14207 255 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms