RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 A0A1W2PR48 441 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 CCDC189A1A4V9 331 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 LRRC14BA6NHZ5 514 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 WASHC1A8K0Z3 465 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 HSPB2A8KAH6 182 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 TRIM3O75382 744 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-231ENST00000488905 CTAG2O75638 210 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 KRT38O76015 456 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 FAM58BPP0C7Q3 252 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 GALNSP34059 522 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 MAGEA4P43358 317 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 IST1P53990 364 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
HDAC6-231ENST00000488905 CAV1Q03135 178 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 CUL3Q13618 768 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 HSPB2Q16082 182 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 CPSF6Q16630 551 aaKnown RBP eCLIP16.91■□□□□ 0.3
HDAC6-231ENST00000488905 TBCELQ5QJ74 424 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 OR52E8Q6IFG1 317 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 GOLGA7Q7Z5G4 137 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 RELL2Q8NC24 303 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-231ENST00000488905 DIO2Q92813 273 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 NINJ1Q92982 152 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 PYCARDQ9ULZ3 195 aa16.91■□□□□ 0.3
HDAC6-231ENST00000488905 C15orf38-AP3S2A0A0A6YYH1 394 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 ANKRD33BA6NCL7 494 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 C2P06681 752 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 SLC35E2P0CK97 266 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 SSTR4P31391 388 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 PEX19P40855 299 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 CRYZQ08257 329 aaKnown RBP16.9■□□□□ 0.3
HDAC6-231ENST00000488905 DUSP8Q13202 625 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 SNTB1Q13884 538 aaKnown RBP16.9■□□□□ 0.3
HDAC6-231ENST00000488905 GTF2H2Q13888 395 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 PCBP2Q15366 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDAC6-231ENST00000488905 ACSF3Q4G176 576 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-231ENST00000488905 GTF2H2CQ6P1K8 395 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 ZDHHC24Q6UX98 284 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 NAXEQ8NCW5 288 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 WDR20Q8TBZ3 569 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 GPATCH1Q9BRR8 931 aaKnown RBP16.9■□□□□ 0.3
HDAC6-231ENST00000488905 POLDIP3Q9BY77 421 aaKnown RBP16.9■□□□□ 0.3
HDAC6-231ENST00000488905 IPPKQ9H8X2 491 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 SNX15Q9NRS6 342 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 NAV3Q8IVL0 2385 aa16.9■□□□□ 0.3
HDAC6-231ENST00000488905 C2orf92A0A1B0GVN3 265 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 A0A1W2PS29 197 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 DVL2O14641 736 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 TP53I11O14683 189 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 GBAP04062 536 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 BMP5P22003 454 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 UQCRC1P31930 480 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 PIK3CGP48736 1102 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 TMED10P49755 219 aaKnown RBP16.89■□□□□ 0.29
HDAC6-231ENST00000488905 ASCL1P50553 236 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 FBXW4P57775 412 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 ACAP2Q15057 778 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 MROH9Q5TGP6 573 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 TMEM198Q66K66 360 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 BICRALQ6AI39 1079 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 TMEM64Q6YI46 380 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 GALNT12Q8IXK2 581 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 L3MBTL4Q8NA19 623 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 UCN3Q969E3 161 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 RILPQ96NA2 401 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 FOXC2Q99958 501 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 SH3GL2Q99962 352 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 RAB17Q9H0T7 212 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 CXXC4Q9H2H0 198 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 CLEC4MQ9H2X3 399 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-231ENST00000488905 CXorf21Q9HAI6 301 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 ZNF358Q9NW07 568 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 TEX10Q9NXF1 929 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-231ENST00000488905 PSD3Q9NYI0 1048 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 CRIM1Q9NZV1 1036 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 RNF11Q9Y3C5 154 aa16.89■□□□□ 0.29
HDAC6-231ENST00000488905 HMX2A2RU54 273 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 CAPN14A8MX76 684 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 KDM4EB2RXH2 506 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 FOXE1O00358 373 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 SEMA3DO95025 777 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 KLHL2O95198 593 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 SIX3O95343 332 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 CT62P0C5K7 136 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 NEK2P51955 445 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 WNT3P56703 355 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 TRADDQ15628 312 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 HLA-DQA1Q5Y7H0 255 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 METTL2BQ6P1Q9 378 aaKnown RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 KLC3Q6P597 504 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 LACC1Q8IV20 430 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 TNIP2Q8NFZ5 429 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 TP53INP1Q96A56 240 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 RMND5BQ96G75 393 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 SECISBP2Q96T21 854 aaKnown RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 UBQLN3Q9H347 655 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 CCM2LQ9NUG4 571 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 CPSF2Q9P2I0 782 aaKnown RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 ST6GALNAC2Q9UJ37 374 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms