RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 POLR2CP19387 275 aaPredicted RBP13.46□□□□□ -0.25
COL16A1-214ENST00000488128 CXCL3P19876 107 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 DDCP20711 480 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
COL16A1-214ENST00000488128 GINS1Q14691 196 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 SYT14P1Q58G82 188 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 TCTN3Q6NUS6 607 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 MTFR2Q6P444 385 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 CLDN22Q8N7P3 220 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 OR52N2Q8NGI0 321 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 GTPBP2Q9BX10 602 aaKnown RBP13.46□□□□□ -0.25
COL16A1-214ENST00000488128 ZDHHC3Q9NYG2 299 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 CORO2BQ9UQ03 480 aa13.46□□□□□ -0.25
COL16A1-214ENST00000488128 ARHGEF33A8MVX0 844 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 SLC30A4O14863 429 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 PRMT3O60678 531 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 TSPAN9O75954 239 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 ARHGEF15O94989 841 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 KLK1P06870 262 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 LHCGRP22888 699 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 PPIBP23284 216 aaKnown RBP13.46□□□□□ -0.26
COL16A1-214ENST00000488128 ELAVL4P26378 380 aaKnown RBP13.46□□□□□ -0.26
COL16A1-214ENST00000488128 AP2S1P53680 142 aaPredicted RBP13.46□□□□□ -0.26
COL16A1-214ENST00000488128 CLDN20P56880 219 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 SP3Q02447 781 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 RPA4Q13156 261 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 TRIM40Q6P9F5 258 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 OR8J1Q8NGP2 316 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 NEIL2Q969S2 332 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 PPCDCQ96CD2 204 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 SCLYQ96I15 445 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 SLC22A12Q96S37 553 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 GPA33Q99795 319 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 ABCG4Q9H172 646 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 SEMA3GQ9NS98 782 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 SH2B3Q9UQQ2 575 aa13.46□□□□□ -0.26
COL16A1-214ENST00000488128 TEX46H3BTG2 121 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 M0R3H8 397 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 NR2F6P10588 404 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 PIPP12273 146 aaPredicted RBP13.45□□□□□ -0.26
COL16A1-214ENST00000488128 SELPP16109 830 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 PTX3P26022 381 aaPredicted RBP13.45□□□□□ -0.26
COL16A1-214ENST00000488128 PER3P56645 1201 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 CDKN3Q16667 212 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 CRB2Q5IJ48 1285 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 HECTD3Q5T447 861 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 AGTRAPQ6RW13 159 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 TEX261Q6UWH6 196 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 HSDL2Q6YN16 418 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 COMMD6Q7Z4G1 85 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 GPR32P1Q8NGA4 272 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 TMEM43Q9BTV4 400 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 EGLN3Q9H6Z9 239 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 RC3H2Q9HBD1 1191 aaKnown RBP13.45□□□□□ -0.26
COL16A1-214ENST00000488128 NUDT15Q9NV35 164 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 U3KQ87 197 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 C5orf58C9J3I9 102 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 SHOXO15266 292 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 NUPL2O15504 423 aaKnown RBP13.45□□□□□ -0.26
COL16A1-214ENST00000488128 ALDH1A1P00352 501 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 GSTM1P09488 218 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 FAM157BP0CG42 384 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 TIA1P31483 386 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL16A1-214ENST00000488128 ALDH9A1P49189 494 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 HNMTP50135 292 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 HMGA2P52926 109 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 PTSQ03393 145 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 KLHL22Q53GT1 634 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 MARCH9Q86YJ5 346 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 ZNF740Q8NDX6 193 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 CD99L2Q8TCZ2 262 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 C11orf24Q96F05 449 aaPredicted RBP13.45□□□□□ -0.26
COL16A1-214ENST00000488128 MS4A3Q96HJ5 214 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 C17orf62Q9BQA9 187 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 MARVELD1Q9BSK0 173 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 SAP130Q9H0E3 1048 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 MED28Q9H204 178 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 FZD3Q9NPG1 666 aa13.45□□□□□ -0.26
COL16A1-214ENST00000488128 PAK6Q9NQU5 681 aaPredicted RBP13.45□□□□□ -0.26
COL16A1-214ENST00000488128 DOCK6Q96HP0 2047 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 A0A1W2PRB8 838 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 PCP4L1A6NKN8 68 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 RNASET2O00584 256 aaKnown RBP13.44□□□□□ -0.26
COL16A1-214ENST00000488128 NME6O75414 186 aaPredicted RBP13.44□□□□□ -0.26
COL16A1-214ENST00000488128 RAB36O95755 333 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 HRGP04196 525 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 C8GP07360 202 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 CPEP16870 476 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 CCT3P49368 545 aaKnown RBP13.44□□□□□ -0.26
COL16A1-214ENST00000488128 WNT4P56705 351 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 SNRPGP62308 76 aaKnown RBP13.44□□□□□ -0.26
COL16A1-214ENST00000488128 TEKQ02763 1124 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
COL16A1-214ENST00000488128 PLD1Q13393 1074 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 ILKQ13418 452 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 ZNF791Q3KP31 576 aaPredicted RBP13.44□□□□□ -0.26
COL16A1-214ENST00000488128 IDNKQ5T6J7 187 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 TIGD3Q6B0B8 471 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 PGBD2Q6P3X8 592 aa13.44□□□□□ -0.26
COL16A1-214ENST00000488128 PLEKHM3Q6ZWE6 761 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms