RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 MYLK4Q86YV6 388 aaPredicted RBP7.85□□□□□ -1.15
PRKCB-208ENST00000487674 LIX1LQ8IVB5 337 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 ZZZ3Q8IYH5 903 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 ULK2Q8IYT8 1036 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 VWA5B2Q8N398 1253 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 LIX1Q8N485 282 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 PPM1NQ8N819 430 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 OR10G3Q8NGC4 313 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 RHEBL1Q8TAI7 183 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 NEIL3Q8TAT5 605 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 NRGNQ92686 78 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 PPWD1Q96BP3 646 aaKnown RBP7.85□□□□□ -1.15
PRKCB-208ENST00000487674 REPS1Q96D71 796 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 ZNF597Q96LX8 424 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 MTERF1Q99551 399 aaKnown RBP7.85□□□□□ -1.15
PRKCB-208ENST00000487674 FOXC2Q99958 501 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 DOHHQ9BU89 302 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 ERVK-6Q9BXR3 956 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 ZNF717Q9BY31 904 aaPredicted RBP7.85□□□□□ -1.15
PRKCB-208ENST00000487674 CXXC4Q9H2H0 198 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 SLC6A15Q9H2J7 730 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 ACTR8Q9H981 624 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 DNAJB12Q9NXW2 375 aaKnown RBP7.85□□□□□ -1.15
PRKCB-208ENST00000487674 GRHL1Q9NZI5 618 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 CNOT11Q9UKZ1 510 aaKnown RBP7.85□□□□□ -1.15
PRKCB-208ENST00000487674 ERVK-19Q9WJR5 959 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 PCDHGA11Q9Y5H2 935 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 ZFHX3Q15911 3703 aa7.85□□□□□ -1.15
PRKCB-208ENST00000487674 PRRC2AP48634 2157 aaKnown RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 A0A0A6YYD5 115 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 FAM221AA4D161 298 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ANKRD33BA6NCL7 494 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 H0YIV9 168 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 PROM1O43490 865 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 RAD51CO43502 376 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 UGDHO60701 494 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 TRIM3O75382 744 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 PRKRAO75569 313 aaKnown RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 FAM155BO75949 473 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 GPR75O95800 540 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 AIFM1O95831 613 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 CLPSP04118 112 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 MTHFD2P13995 350 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 PTX3P26022 381 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 GDF1P27539 372 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 KIR2DL3P43628 341 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ASCL1P50553 236 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 IST1P53990 364 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 RPS13P62277 151 aaKnown RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 MRPS25P82663 173 aaKnown RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 CUL3Q13618 768 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ZNF267Q14586 743 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 SETDB1Q15047 1291 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 RPS6KA2Q15349 733 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ACSF3Q4G176 576 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 LIPJQ5W064 366 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 OR52E8Q6IFG1 317 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 MRM1Q6IN84 353 aaKnown RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 CYP20A1Q6UW02 462 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 SEM1Q6ZVN7 128 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 MAATS1Q7Z4T9 603 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 NUDT13Q86X67 352 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 CENPLQ8N0S6 344 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 TAGAPQ8N103 731 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 RNF175Q8N4F7 328 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 TEX9Q8N6V9 391 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ZNF441Q8N8Z8 693 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 RELL2Q8NC24 303 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 CHDHQ8NE62 594 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 RIT1Q92963 219 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 LRRC46Q96FV0 321 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 RMND5BQ96G75 393 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 JSRP1Q96MG2 331 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 POLDIP3Q9BY77 421 aaKnown RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 CLEC4MQ9H2X3 399 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 DDX31Q9H8H2 851 aaKnown RBP7.84□□□□□ -1.15
PRKCB-208ENST00000487674 WDR41Q9HAD4 459 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 PROK2Q9HC23 129 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ALKBH4Q9NXW9 302 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ACOT9Q9Y305 439 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ASB4Q9Y574 426 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ANGPTL3Q9Y5C1 460 aa7.84□□□□□ -1.15
PRKCB-208ENST00000487674 ABCA4P78363 2273 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 NINQ8N4C6 2090 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 A0A087X1B8 175 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 C15orf38-AP3S2A0A0A6YYH1 394 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 A0A1W2PR48 441 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 GLOD5A6NK44 160 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 CAPN14A8MX76 684 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 SYT5O00445 386 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 DVL2O14641 736 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 TP53I11O14683 189 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 TMPRSS11DO60235 418 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 EEDO75530 441 aaKnown RBP7.83□□□□□ -1.16
PRKCB-208ENST00000487674 SEMA3DO95025 777 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 LRATO95237 230 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 FAM58BPP0C7Q3 252 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 SLC35E2P0CK97 266 aa7.83□□□□□ -1.16
PRKCB-208ENST00000487674 GFAPP14136 432 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms