RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PIN1Q13526 163 aaPredicted RBP11.21□□□□□ -0.61
TRA2B-214ENST00000487615 CAPSLQ8WWF8 208 aa11.21□□□□□ -0.61
TRA2B-214ENST00000487615 ACTL8Q9H568 366 aa11.21□□□□□ -0.61
TRA2B-214ENST00000487615 TBCCD1Q9NVR7 557 aa11.21□□□□□ -0.61
TRA2B-214ENST00000487615 ANKMY1Q9P2S6 941 aa11.21□□□□□ -0.61
TRA2B-214ENST00000487615 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.61
TRA2B-214ENST00000487615 M0R3H8 397 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 DCKP27707 260 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 TIAL1Q01085 375 aaKnown RBP eCLIP11.21□□□□□ -0.62
TRA2B-214ENST00000487615 ALG11Q2TAA5 492 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 TECPR1Q7Z6L1 1165 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 LRR1Q96L50 414 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 ASB16Q96NS5 453 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 ASPNQ9BXN1 380 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 TMEM5Q9Y2B1 443 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 RALGAPA2Q2PPJ7 1873 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 CCDC85CA6NKD9 419 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 CDRT1O95170 752 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 HLA-DPB1P04440 258 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 HMGN2P05204 90 aaKnown RBP11.21□□□□□ -0.62
TRA2B-214ENST00000487615 ZNF3P17036 446 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 MLLT3P42568 568 aaPredicted RBP11.21□□□□□ -0.62
TRA2B-214ENST00000487615 DAPP51397 102 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 POU6F2P78424 691 aaPredicted RBP11.21□□□□□ -0.62
TRA2B-214ENST00000487615 LCN1P1Q5VSP4 162 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.62
TRA2B-214ENST00000487615 FIGLAQ6QHK4 219 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 OR4N5Q8IXE1 308 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 INSM2Q96T92 566 aaPredicted RBP11.21□□□□□ -0.62
TRA2B-214ENST00000487615 RACGAP1Q9H0H5 632 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 ACSS1Q9NUB1 689 aaPredicted RBP11.21□□□□□ -0.62
TRA2B-214ENST00000487615 OR6C2Q9NZP2 312 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 THAP10Q9P2Z0 257 aaPredicted RBP11.21□□□□□ -0.62
TRA2B-214ENST00000487615 IKZF2Q9UKS7 526 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 PPIL1Q9Y3C6 166 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 PCDHGB1Q9Y5G3 927 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.62
TRA2B-214ENST00000487615 ANK1P16157 1881 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 PORP16435 677 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 HIST1H1TP22492 207 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SLC15A1P46059 708 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SOX9P48436 509 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 MRPL19P49406 292 aaKnown RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 DSG2Q14126 1118 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 MLIPQ5VWP3 458 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 FOXB2Q5VYV0 432 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 B3GNT8Q7Z7M8 397 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SLC22A16Q86VW1 577 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 PRSS58Q8IYP2 241 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 POMGNT2Q8NAT1 580 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 OR5D16Q8NGK9 328 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 MACROD1Q9BQ69 325 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ITGB1BP2Q9UKP3 347 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 EXOSC1Q9Y3B2 195 aaKnown RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SIP14410 1827 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SLC16A6O15403 523 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 HCN1O60741 890 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ENPP2Q13822 863 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 CCDC157Q569K6 752 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 CEP68Q76N32 757 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 KRT74Q7RTS7 529 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 MARCH9Q86YJ5 346 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ZNF354BQ96LW1 612 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 NECTIN4Q96NY8 510 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 MS4A8Q9BY19 250 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 NAA50Q9GZZ1 169 aaKnown RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ADAM29Q9UKF5 820 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 CYP8B1Q9UNU6 501 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 IGLV3-16A0A075B6K0 115 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ASPDHA6ND91 283 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 IDH3BO43837 385 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 PTNP21246 168 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ACVR2AP27037 513 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 PIGAP37287 484 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SRP54P61011 504 aaKnown RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 PTGES3Q15185 160 aaKnown RBP11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ARMCX6Q7L4S7 300 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 FAM217AQ8IXS0 508 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SLC15A4Q8N697 577 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 CSNK1A1LQ8N752 337 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 HORMAD2Q8N7B1 307 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SLC30A2Q9BRI3 323 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 ACTRT3Q9BYD9 372 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 SLC2A4RGQ9NR83 387 aa11.2□□□□□ -0.62
TRA2B-214ENST00000487615 XKRYO14609 159 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 IL1RNP18510 177 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 TPTEP56180 551 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 CLDN2P57739 230 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 PPP2R2BQ00005 443 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 ZNF45Q02386 682 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 DPTQ07507 201 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 C1orf61Q13536 156 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 SMN1Q16637 294 aaKnown RBP11.19□□□□□ -0.62
TRA2B-214ENST00000487615 NIPAL1Q6NVV3 410 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 ADAMTS19Q8TE59 1207 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 TP53INP1Q96A56 240 aa11.19□□□□□ -0.62
TRA2B-214ENST00000487615 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.19□□□□□ -0.62
TRA2B-214ENST00000487615 MARCH7Q9H992 704 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms