RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ACAP2Q15057 778 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 BICRALQ6AI39 1079 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 NUDT13Q86X67 352 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 ZZZ3Q8IYH5 903 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 TAGAPQ8N103 731 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 L3MBTL4Q8NA19 623 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 MYRIPQ8NFW9 859 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 DIO2Q92813 273 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 CDK15Q96Q40 435 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 RAB17Q9H0T7 212 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 WDR41Q9HAD4 459 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 DNAJB12Q9NXW2 375 aaKnown RBP17.66■□□□□ 0.42
COL27A1-205ENST00000485397 CPSF2Q9P2I0 782 aaKnown RBP17.66■□□□□ 0.42
COL27A1-205ENST00000485397 C2orf92A0A1B0GVN3 265 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 FAM47E-STBD1D6RA91 191 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 UGDHO60701 494 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 TRIM3O75382 744 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-205ENST00000485397 KLHL2O95198 593 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 CT62P0C5K7 136 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 GDF1P27539 372 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 GALNSP34059 522 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 IST1P53990 364 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 WNT3P56703 355 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 FBXW4P57775 412 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 DUSP8Q13202 625 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 UAP1Q16222 522 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-205ENST00000485397 TMEM198Q66K66 360 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 NAXEQ8NCW5 288 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 CXorf21Q9HAI6 301 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 TEX10Q9NXF1 929 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-205ENST00000485397 PSD3Q9NYI0 1048 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 B4GALT7Q9UBV7 327 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 PCDHGB3Q9Y5G1 929 aa17.65■□□□□ 0.42
COL27A1-205ENST00000485397 C15orf38-AP3S2A0A0A6YYH1 394 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 CCDC189A1A4V9 331 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 HSPB2A8KAH6 182 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 FOXE1O00358 373 aaPredicted RBP17.64■□□□□ 0.41
COL27A1-205ENST00000485397 OR7A17O14581 309 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 CTAG2O75638 210 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 HSPB2Q16082 182 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 OR52E8Q6IFG1 317 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 CCDC91Q7Z6B0 441 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 PLD6Q8N2A8 252 aaKnown RBP17.64■□□□□ 0.41
COL27A1-205ENST00000485397 RELL2Q8NC24 303 aaPredicted RBP17.64■□□□□ 0.41
COL27A1-205ENST00000485397 TNIP2Q8NFZ5 429 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 SPPL2AQ8TCT8 520 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 TP53INP1Q96A56 240 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 ZNF597Q96LX8 424 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 NOL11Q9H8H0 719 aaKnown RBP17.64■□□□□ 0.41
COL27A1-205ENST00000485397 ZNF358Q9NW07 568 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 TNPO3Q9Y5L0 923 aaKnown RBP17.64■□□□□ 0.41
COL27A1-205ENST00000485397 NPFFR2Q9Y5X5 522 aa17.64■□□□□ 0.41
COL27A1-205ENST00000485397 ESYT3A0FGR9 886 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ANKRD33BA6NCL7 494 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 SYT5O00445 386 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 TP53I11O14683 189 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 TRAPPC6AO75865 159 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 CLDN9O95484 217 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ACSL3O95573 720 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ALDOAP04075 364 aaKnown RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 PIK3R1P27986 724 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 TYK2P29597 1187 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 CASQ1P31415 396 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 UQCRC1P31930 480 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ARL1P40616 181 aaPredicted RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 KIR2DL3P43628 341 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 CRYZQ08257 329 aaKnown RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 FUT7Q11130 342 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 RPS6KA2Q15349 733 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ACSF3Q4G176 576 aaPredicted RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 TECRLQ5HYJ1 363 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 TBCELQ5QJ74 424 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 UBAP2Q5T6F2 1119 aaKnown RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 HLA-DQA1Q5Y7H0 255 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 KLC3Q6P597 504 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 GALNT12Q8IXK2 581 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 PRR22Q8IZ63 422 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ZNF615Q8N8J6 731 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 PTGR2Q8N8N7 351 aaPredicted RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 OR52B6Q8NGF0 335 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ATP6V1E2Q96A05 226 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ADIPOR1Q96A54 375 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 SERPINI1Q99574 410 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 TIMP4Q99727 224 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 GPATCH1Q9BRR8 931 aaKnown RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 POLDIP3Q9BY77 421 aaKnown RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 VPS11Q9H270 941 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 LIME1Q9H400 295 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 RYDENQ9NUL5 291 aaKnown RBP17.63■□□□□ 0.41
COL27A1-205ENST00000485397 CRIM1Q9NZV1 1036 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 FREM3P0C091 2139 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 MTORP42345 2549 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 AKAP6Q13023 2319 aa17.63■□□□□ 0.41
COL27A1-205ENST00000485397 ARHGAP21Q5T5U3 1957 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 PRRC2AP48634 2157 aaKnown RBP17.62■□□□□ 0.41
COL27A1-205ENST00000485397 CAPN14A8MX76 684 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 AHRRA9YTQ3 701 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 DIAPH2O60879 1101 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 EPPINO95925 133 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 KLK1P06870 262 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms