RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 LIMK2P53671 638 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 AP3M2P53677 418 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 GEMP55040 296 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 CLDN15P56746 228 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 FKBP1AP62942 108 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 ZXDBP98169 803 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 HOXA4Q00056 320 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 SLC3A1Q07837 685 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 DMPKQ09013 629 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 PJVKQ0ZLH3 352 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 TRDNQ13061 729 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 GAGE2BQ13066 116 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 MYBPHQ13203 477 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 HNRNPDQ14103 355 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 EFNB3Q15768 340 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 CA9Q16790 459 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 GAGE2EQ4V326 116 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 GPAT3Q53EU6 434 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 MPPE1Q53F39 396 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 ZC2HC1CQ53FD0 456 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 PHLDA2Q53GA4 152 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 PDLIM3Q53GG5 364 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 FSCBQ5H9T9 825 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 GRTP1Q5TC63 336 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 MFSD14CQ5VZR4 134 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 CARD17Q5XLA6 110 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 FRG2Q64ET8 278 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 KIAA1161Q6NSJ0 714 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 GAGE2AQ6NT46 116 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 C11orf63Q6NUN7 778 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 CEP85Q6P2H3 762 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 KCTD18Q6PI47 426 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 CBLN3Q6UW01 205 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 CD164L2Q6UWJ8 174 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 PAQR9Q6ZVX9 377 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 ZNF367Q7RTV3 350 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 YRDCQ86U90 279 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 BIVMQ86UB2 503 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 WDR49Q8IV35 697 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 C1orf52Q8N6N3 182 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 FAM98AQ8NCA5 519 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 SLC44A5Q8NCS7 719 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 TRPV3Q8NET8 790 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 ZNF397Q8NF99 534 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 OR4K1Q8NGD4 311 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 OR9K2Q8NGE7 335 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 OR9A1PQ8NGU1 263 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 GADD45GIP1Q8TAE8 222 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 CHPT1Q8WUD6 406 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 ANP32BQ92688 251 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 TAAR8Q969N4 342 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 NCLNQ969V3 563 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 EFHD2Q96C19 240 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 LRRC39Q96DD0 335 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 C11orf24Q96F05 449 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 ZNF48Q96MX3 618 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 GPR137Q96N19 417 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 VPS35Q96QK1 796 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 MTERF1Q99551 399 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 PRMT1Q99873 361 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 KXD1Q9BQD3 176 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 CCDC3Q9BQI4 270 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 BPIFA3Q9BQP9 254 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 TMEM43Q9BTV4 400 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 POLDIP3Q9BY77 421 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 GSDMCQ9BYG8 508 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 RIMS4Q9H426 269 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 ZDHHC6Q9H6R6 413 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 Q9H8V8 135 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 MEAF6Q9HAF1 191 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 APMAPQ9HDC9 416 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 SPAG4Q9NPE6 437 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 DDX28Q9NUL7 540 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 SPATA7Q9P0W8 599 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 KLHL9Q9P2J3 617 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 GAGE2DQ9UEU5 116 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 TBX21Q9UL17 535 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 IFT52Q9Y366 437 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 OR10H1Q9Y4A9 318 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 NME7Q9Y5B8 376 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 PLXNA3P51805 1871 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 FNDC1Q4ZHG4 1894 aaPredicted RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 ATRXP46100 2492 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 MAP1BP46821 2468 aaKnown RBP3□□□□□ -1.93
ZNF561-216ENST00000483768 ATAD5Q96QE3 1844 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 CACNA1HO95180 2353 aa3□□□□□ -1.93
ZNF561-216ENST00000483768 WDR87Q6ZQQ6 2873 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 RIF1Q5UIP0 2472 aaKnown RBP2.99□□□□□ -1.93
ZNF561-216ENST00000483768 GVINP1Q7Z2Y8 2422 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 MBLAC1A4D2B0 266 aaPredicted RBP2.99□□□□□ -1.93
ZNF561-216ENST00000483768 LRRC3CA6NJW4 275 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 C2CD4BA6NLJ0 364 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 BECN2A8MW95 431 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 C17orf105B2RV13 164 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 TMEM178BH3BS89 294 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 M0R296 226 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 CETN3O15182 167 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 ALOX15BO15296 676 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 RNF13O43567 381 aa2.99□□□□□ -1.93
ZNF561-216ENST00000483768 BCAS1O75363 584 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms