RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 WDR34Q96EX3 536 aa17.14■□□□□ 0.33
SSR4-209ENST00000482902 ZC3HAV1LQ96H79 300 aaKnown RBP17.14■□□□□ 0.33
SSR4-209ENST00000482902 WRAP53Q9BUR4 548 aaKnown RBP17.14■□□□□ 0.33
SSR4-209ENST00000482902 SPNS1Q9H2V7 528 aa17.14■□□□□ 0.33
SSR4-209ENST00000482902 SLC25A19Q9HC21 320 aa17.14■□□□□ 0.33
SSR4-209ENST00000482902 MYNNQ9NPC7 610 aa17.14■□□□□ 0.33
SSR4-209ENST00000482902 ING3Q9NXR8 418 aa17.14■□□□□ 0.33
SSR4-209ENST00000482902 GLTPQ9NZD2 209 aa17.14■□□□□ 0.33
SSR4-209ENST00000482902 RAB23Q9ULC3 237 aa17.14■□□□□ 0.33
SSR4-209ENST00000482902 NDRG2Q9UN36 371 aaKnown RBP17.14■□□□□ 0.33
SSR4-209ENST00000482902 ZAR1LA6NP61 321 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 A8MVJ9 347 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 PLD2O14939 933 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 IFNA14P01570 189 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 MSL3P1P0C860 447 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 FAM157BP0CG42 384 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 SYN1P17600 705 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 RPL3P39023 403 aaKnown RBP17.13■□□□□ 0.33
SSR4-209ENST00000482902 LCN1P1Q5VSP4 162 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 SLC39A5Q6ZMH5 540 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 TRIM69Q86WT6 500 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 TDP1Q9NUW8 608 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 MCUBQ9NWR8 336 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 HCN4Q9Y3Q4 1203 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
SSR4-209ENST00000482902 A0A1W2PRB8 838 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 CXCL14O95715 111 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 HBQ1P09105 142 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 NAGAP17050 411 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 CNR2P34972 360 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 PPM1AP35813 382 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 ZNF658BQ4V348 819 aaPredicted RBP17.13■□□□□ 0.33
SSR4-209ENST00000482902 FBXO15Q8NCQ5 510 aaPredicted RBP17.13■□□□□ 0.33
SSR4-209ENST00000482902 LRRC20Q8TCA0 184 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 SLC5A11Q8WWX8 675 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 CCDC120Q96HB5 630 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 SGPP1Q9BX95 441 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 CFHR5Q9BXR6 569 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 B3GNT4Q9C0J1 378 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 ANGPT4Q9Y264 503 aa17.13■□□□□ 0.33
SSR4-209ENST00000482902 PROM1O43490 865 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 MPZL2O60487 215 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 ENTPD6O75354 484 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 GADD45GO95257 159 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 IL1AP01583 271 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 HLA-DQB1P01920 261 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 LIMS1P48059 325 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 MAPK12P53778 367 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 TAGLNQ01995 201 aaKnown RBP17.12■□□□□ 0.33
SSR4-209ENST00000482902 PARS2Q7L3T8 475 aaKnown RBP17.12■□□□□ 0.33
SSR4-209ENST00000482902 ABI3BPQ7Z7G0 1075 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 TRAPPC5Q8IUR0 188 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 GPR65Q8IYL9 337 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 C9orf62Q8N4C0 152 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 CLDN22Q8N7P3 220 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 OR9A1PQ8NGU1 263 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 UPRTQ96BW1 309 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 MAPKAP1Q9BPZ7 522 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 RACGAP1Q9H0H5 632 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 FZD3Q9NPG1 666 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 RHCGQ9UBD6 479 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 SSR3Q9UNL2 185 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 ABHD14A-ACY1A0A1B0GW23 586 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 TRBC2A0A5B9 178 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 LINC00862A6NCI5 91 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 IL3P08700 152 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 ARAFP10398 606 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 MAN2A2P49641 1150 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 PCBP3P57721 371 aaKnown RBP17.12■□□□□ 0.33
SSR4-209ENST00000482902 RRAS2P62070 204 aaPredicted RBP17.12■□□□□ 0.33
SSR4-209ENST00000482902 TAP2Q03519 686 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 ZBTB37Q5TC79 503 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 NXPE4Q6UWF7 544 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 MMP21Q8N119 569 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 SLC34A3Q8N130 599 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 AQP11Q8NBQ7 271 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 ZNF740Q8NDX6 193 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 DUSP18Q8NEJ0 188 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 ATP6V1C2Q8NEY4 427 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 C1QTNF7Q9BXJ2 289 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 OR2AG1Q9H205 316 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 RBFOX1Q9NWB1 397 aaKnown RBP17.12■□□□□ 0.33
SSR4-209ENST00000482902 AUP1Q9Y679 476 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 WNT6Q9Y6F9 365 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 CLCA3PQ9Y6N3 262 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 ENPP4Q9Y6X5 453 aa17.12■□□□□ 0.33
SSR4-209ENST00000482902 WASHC1A8K0Z3 465 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 PDPK1O15530 556 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 PDGFAP04085 211 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 ADH1AP07327 375 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 HMGA2P52926 109 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 POU6F2P78424 691 aaPredicted RBP17.11■□□□□ 0.33
SSR4-209ENST00000482902 MAB21L1Q13394 359 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 TJAP1Q5JTD0 557 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 DDI2Q5TDH0 399 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 PXDC1Q5TGL8 231 aa17.11■□□□□ 0.33
SSR4-209ENST00000482902 TRMT11Q7Z4G4 463 aaKnown RBP17.11■□□□□ 0.33
SSR4-209ENST00000482902 KIAA0907Q7Z7F0 614 aaPredicted RBP17.11■□□□□ 0.33
SSR4-209ENST00000482902 PHC2Q8IXK0 858 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms