RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 NRGNQ92686 78 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 DOHHQ9BU89 302 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 NOL11Q9H8H0 719 aaKnown RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 WDR41Q9HAD4 459 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 ZNF358Q9NW07 568 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 TNPO3Q9Y5L0 923 aaKnown RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 C2orf92A0A1B0GVN3 265 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 CCDC189A1A4V9 331 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 OR6C76A6NM76 312 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 FOXE1O00358 373 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-214ENST00000480562 CLDN9O95484 217 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 SERPINB8P50452 374 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 ETF1P62495 437 aaKnown RBP17.3■□□□□ 0.36
ABCF3-214ENST00000480562 SNTB1Q13884 538 aaKnown RBP17.3■□□□□ 0.36
ABCF3-214ENST00000480562 NTRK2Q16620 822 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 TECRLQ5HYJ1 363 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 CES4AQ5XG92 561 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 BICRALQ6AI39 1079 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 WDR53Q7Z5U6 358 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-214ENST00000480562 TAGAPQ8N103 731 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 LIX1Q8N485 282 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 OR52B6Q8NGF0 335 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 DIO2Q92813 273 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 ATP6V1E2Q96A05 226 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 CXorf21Q9HAI6 301 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 ACKR4Q9NPB9 350 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 ZDHHC18Q9NUE0 388 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 TEX10Q9NXF1 929 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-214ENST00000480562 L3MBTL1Q9Y468 752 aa17.3■□□□□ 0.36
ABCF3-214ENST00000480562 SETD2Q9BYW2 2564 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-214ENST00000480562 ZWINTO95229 277 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 CT62P0C5K7 136 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 GABRA1P14867 456 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 GDF1P27539 372 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 GALNSP34059 522 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 FBXW4P57775 412 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 RIPPLY2Q5TAB7 128 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 OR52E8Q6IFG1 317 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 ZNF572Q7Z3I7 529 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-214ENST00000480562 ULK2Q8IYT8 1036 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 ZNF441Q8N8Z8 693 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 NEIL3Q8TAT5 605 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 PHF21BQ96EK2 531 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 SERPINI1Q99574 410 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 PSD3Q9NYI0 1048 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 NINJ2Q9NZG7 142 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 B4GALT7Q9UBV7 327 aa17.29■□□□□ 0.36
ABCF3-214ENST00000480562 TRIM3O75382 744 aaPredicted RBP17.28■□□□□ 0.36
ABCF3-214ENST00000480562 SEMA3DO95025 777 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 KLK1P06870 262 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 PIK3R1P27986 724 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 CCNG1P51959 295 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 WNT3P56703 355 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 DUSP8Q13202 625 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 SLC25A35Q3KQZ1 300 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 HLA-DQA1Q5Y7H0 255 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 SEM1Q6ZVN7 128 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 GALNT12Q8IXK2 581 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 ZNF597Q96LX8 424 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 NSUN5Q96P11 429 aaKnown RBP17.28■□□□□ 0.36
ABCF3-214ENST00000480562 LRRC1Q9BTT6 524 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 QPCTLQ9NXS2 382 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 MTORP42345 2549 aa17.28■□□□□ 0.36
ABCF3-214ENST00000480562 FREM3P0C091 2139 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 C15orf38-AP3S2A0A0A6YYH1 394 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 KDM4EB2RXH2 506 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-214ENST00000480562 TP53I11O14683 189 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 TRAPPC6AO75865 159 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 ACSL3O95573 720 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 PHBP35232 272 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 XKP51811 444 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 ART1P52961 327 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 RPS6KA2Q15349 733 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 SGO1Q5FBB7 561 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 FRG2Q64ET8 278 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 TMEM198Q66K66 360 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 TTC19Q6DKK2 380 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-214ENST00000480562 C8orf74Q6P047 294 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 METTL2BQ6P1Q9 378 aaKnown RBP17.27■□□□□ 0.36
ABCF3-214ENST00000480562 ARSKQ6UWY0 536 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 ZZZ3Q8IYH5 903 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 PRR22Q8IZ63 422 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 ZNF615Q8N8J6 731 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 MYRIPQ8NFW9 859 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 OR4K14Q8NGD5 310 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 SPPL2AQ8TCT8 520 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 RILPQ96NA2 401 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 FRG2BQ96QU4 278 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 OR10A5Q9H207 317 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 ACSS3Q9H6R3 686 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 SLC24A3Q9HC58 644 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 NPFFR2Q9Y5X5 522 aa17.27■□□□□ 0.36
ABCF3-214ENST00000480562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.27■□□□□ 0.36
ABCF3-214ENST00000480562 ANKRD33BA6NCL7 494 aa17.26■□□□□ 0.35
ABCF3-214ENST00000480562 CAPN14A8MX76 684 aa17.26■□□□□ 0.35
ABCF3-214ENST00000480562 FAM47E-STBD1D6RA91 191 aa17.26■□□□□ 0.35
ABCF3-214ENST00000480562 NT5EP21589 574 aa17.26■□□□□ 0.35
ABCF3-214ENST00000480562 DNAJA1P31689 397 aaKnown RBP17.26■□□□□ 0.35
ABCF3-214ENST00000480562 FUT7Q11130 342 aa17.26■□□□□ 0.35
ABCF3-214ENST00000480562 TRAF3Q13114 568 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms