RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TMEM110Q86TL2 294 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 FBXO39Q8N4B4 442 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 DNAJC22Q8N4W6 341 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 LEMD2Q8NC56 503 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 STKLD1Q8NE28 680 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 FGFBP3Q8TAT2 258 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 ZNF564Q8TBZ8 553 aaPredicted RBP3.53□□□□□ -1.84
UBR3-209ENST00000477461 MRGPRDQ8TDS7 321 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 RNF139Q8WU17 664 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 IRGQQ8WZA9 623 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 HSD17B8Q92506 261 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 MRPS31Q92665 395 aaKnown RBP3.53□□□□□ -1.84
UBR3-209ENST00000477461 PSMG2Q969U7 264 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 MCEEQ96PE7 176 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 ALS2CR12Q96Q35 445 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 ABHD1Q96SE0 405 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 CPXM1Q96SM3 734 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 NUP85Q9BW27 656 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 ULBP1Q9BZM6 244 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 NACA2Q9H009 215 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 THAP2Q9H0W7 228 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 LZTFL1Q9NQ48 299 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 ABCC13Q9NSE7 274 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 PARVAQ9NVD7 372 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 UVRAGQ9P2Y5 699 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 LCMT1Q9UIC8 334 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 STAP1Q9ULZ2 295 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 SLC7A7Q9UM01 511 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 GUCA1BQ9UMX6 200 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 PPP2R2CQ9Y2T4 447 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 FAM169AQ9Y6X4 670 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 CEP350Q5VT06 3117 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 PRRC2BQ5JSZ5 2229 aaKnown RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 DENND4CQ5VZ89 1909 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 SYNJ2BP-COX16A0A087WUM0 186 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 hCG_1809904A0A1W2PP81 198 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 A0A1W2PPE2 198 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 A0A1W2PR64 198 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 A0A1W2PRB8 838 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 FEZF1A0PJY2 475 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 OR6C76A6NM76 312 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 SIGLEC16A6NMB1 481 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ZNF197O14709 1029 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ZNF263O14978 683 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 DCXO43602 365 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 BUB1O43683 1085 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 SPOPO43791 374 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 KIF5CO60282 957 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 PIGNO95427 931 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 NADKO95544 446 aaPredicted RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 ABCB1P08183 1280 aaPredicted RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 FOSL2P15408 326 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 PDGFRAP16234 1089 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 HOXB8P17481 243 aaPredicted RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 PSMA2P25787 234 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ITGA3P26006 1051 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 GABRR2P28476 465 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 CDC25CP30307 473 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 HOXA9P31269 272 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 SDC4P31431 198 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 RPL34P49207 117 aaKnown RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 SULT1E1P49888 294 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 GSCP56915 257 aaPredicted RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 DAOAP59103 153 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 YWHAGP61981 247 aaKnown RBP eCLIP3.52□□□□□ -1.85
UBR3-209ENST00000477461 TAF10Q12962 218 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 PIGHQ14442 188 aaPredicted RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 CDO1Q16878 200 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ODF2Q5BJF6 829 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 C10orf120Q5SQS8 335 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 HECTD3Q5T447 861 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 RNASEH2BQ5TBB1 312 aaKnown RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 PM20D1Q6GTS8 502 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 TMEM211Q6ICI0 200 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 DNAJB7Q7Z6W7 309 aaPredicted RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 ISCA2Q86U28 154 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ZSCAN30Q86W11 494 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 SYCE1Q8N0S2 351 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 DEFB106AQ8N104 65 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 CCAR2Q8N163 923 aaKnown RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 RNF10Q8N5U6 811 aaKnown RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 DEFB123Q8N688 67 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 CFAP61Q8NHU2 1237 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 RXFP2Q8WXD0 754 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 SLAMF9Q96A28 289 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 SERPINB11Q96P15 392 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 MYADMQ96S97 322 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ANKZF1Q9H8Y5 726 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 POPDC2Q9HBU9 364 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.52□□□□□ -1.85
UBR3-209ENST00000477461 FLRT3Q9NZU0 649 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 COX16Q9P0S2 106 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ASIC3Q9UHC3 531 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 CYTH4Q9UIA0 394 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ANAPC7Q9UJX3 599 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 PYCARDQ9ULZ3 195 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 SCML2Q9UQR0 700 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 MAGED1Q9Y5V3 778 aaPredicted RBP3.52□□□□□ -1.85
UBR3-209ENST00000477461 MTCH2Q9Y6C9 303 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms